Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG/mmsA   Type   Machinery gene
Locus tag   ACKWPP_RS02075 Genome accession   NZ_CP176418
Coordinates   384496..386514 (+) Length   672 a.a.
NCBI ID   WP_024402106.1    Uniprot ID   -
Organism   Streptococcus suis strain KKAHC02     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 379496..391514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKWPP_RS02075 (ACKWPP_02075) recG/mmsA 384496..386514 (+) 2019 WP_024402106.1 ATP-dependent DNA helicase RecG Machinery gene
  ACKWPP_RS02080 (ACKWPP_02080) - 386657..388128 (+) 1472 Protein_372 IS1182 family transposase -
  ACKWPP_RS02085 (ACKWPP_02085) - 388152..389111 (-) 960 WP_409374091.1 asparaginase -
  ACKWPP_RS02090 (ACKWPP_02090) - 389181..390546 (+) 1366 Protein_374 Cof-type HAD-IIB family hydrolase -
  ACKWPP_RS02095 (ACKWPP_02095) - 390562..391014 (-) 453 WP_004195772.1 universal stress protein -

Sequence


Protein


Download         Length: 672 a.a.        Molecular weight: 75628.13 Da        Isoelectric Point: 6.2217

>NTDB_id=966823 ACKWPP_RS02075 WP_024402106.1 384496..386514(+) (recG/mmsA) [Streptococcus suis strain KKAHC02]
MKRLCDELSVLPGIGPKSAEKFLKINIQNINDLLTYYPFRYEDFESKSIYDLQDGEKAVVVGEVVSPANVQYYGYKRNRL
RFSMKQGEVVLAVSFFNQPYLADKIVLGQDIAVWGKWDKAKASLTGMKILAQVSDELQPVYHVAQGISQVNLVKAIKTAI
DQGYLHLLEESLPSVLRERYRLMNRREAVFAMHFPTNLEEYRQALRRMKFEELFYFQLQLQMLKANNRDISNGLKIAYDA
DRLAMQIRQLPFVLTDAQSGALAEILSDMKSYGHMNRLLQGDVGSGKTVVAGLAMFAAVTAGMQAAIMVPTEILAEQHFE
SLRQLFPELSIALLTGGMKAAERRTALEAISSGQVDIIVGTHALIQESVSYHKLGLVVTDEQHRFGVKQRRLFREKGDNP
DVLMMTATPIPRTLAITAFGDMDVSIINQLPAGRKPIITRWVKHQQLPTVLDWLERELEVGAQVYFISPLIEESEALDLK
NAVDLQSDLQAHFGEQVAVDLLHGKMKNDEKDAIMQAFKERKTNILVSTTVIEVGVNVPNATVMVIMDADRFGLSQLHQL
RGRVGRGHKQSYAVLVANPKTESGKERMKIMTETTDGFILAEADLKMRGSGEIFGTRQSGLPEFQVANIIEDYPILEEAR
RVASQIVSVENWQEDPNWSILLANLKDREELD

Nucleotide


Download         Length: 2019 bp        

>NTDB_id=966823 ACKWPP_RS02075 WP_024402106.1 384496..386514(+) (recG/mmsA) [Streptococcus suis strain KKAHC02]
ATGAAAAGACTATGTGATGAATTATCGGTTTTGCCAGGGATTGGTCCAAAATCGGCTGAAAAATTCTTAAAAATTAACAT
TCAGAATATTAATGATTTGCTGACTTACTATCCATTTAGATATGAAGATTTTGAGAGTAAGTCTATTTATGATTTGCAGG
ATGGGGAGAAGGCAGTGGTAGTTGGGGAGGTGGTATCTCCAGCTAATGTACAGTATTATGGCTACAAAAGAAATAGACTC
CGTTTTTCAATGAAACAGGGTGAGGTTGTCTTAGCAGTTTCGTTTTTTAATCAGCCTTATTTAGCAGATAAGATTGTTTT
GGGGCAGGATATTGCAGTTTGGGGAAAGTGGGATAAGGCTAAGGCAAGTTTGACAGGAATGAAAATTTTGGCTCAAGTAT
CAGATGAGCTCCAACCTGTCTATCATGTGGCGCAAGGGATTTCGCAAGTAAATTTGGTTAAGGCTATTAAAACAGCTATT
GATCAGGGATATTTGCATTTATTAGAGGAGAGCTTGCCATCAGTTTTACGAGAGCGCTATCGGTTAATGAATCGCCGAGA
GGCGGTTTTTGCAATGCATTTTCCGACAAATTTAGAAGAGTATAGACAAGCTTTGCGACGTATGAAGTTTGAGGAATTAT
TTTATTTTCAATTACAGTTGCAAATGCTGAAAGCCAACAATCGTGATATTTCGAATGGTTTGAAGATTGCCTATGATGCT
GATAGATTGGCTATGCAAATAAGACAATTGCCGTTTGTCTTAACAGATGCTCAGTCTGGGGCTTTGGCTGAAATACTATC
AGATATGAAGTCCTATGGGCACATGAATCGTTTGTTACAAGGGGATGTTGGTTCAGGGAAGACAGTAGTTGCTGGATTGG
CTATGTTTGCTGCTGTGACTGCGGGGATGCAGGCTGCAATTATGGTGCCGACAGAAATTTTGGCTGAGCAACACTTTGAG
AGTTTGCGCCAGCTTTTTCCAGAACTTTCTATTGCTCTTTTGACAGGGGGAATGAAGGCTGCTGAGCGTCGTACTGCTTT
AGAGGCGATTTCTAGTGGTCAGGTAGACATCATTGTAGGAACTCACGCTCTTATCCAGGAAAGTGTGTCGTATCATAAGC
TTGGTTTGGTTGTGACGGATGAGCAACATCGTTTTGGTGTTAAACAGCGCCGTCTGTTTCGTGAGAAGGGTGATAATCCG
GATGTGCTTATGATGACTGCTACACCTATTCCTCGGACGTTAGCCATTACAGCTTTTGGAGATATGGATGTATCGATTAT
TAATCAGTTACCTGCTGGTCGGAAGCCAATTATCACTCGCTGGGTCAAACATCAACAGCTGCCCACGGTCTTAGATTGGT
TGGAGCGGGAGTTAGAAGTGGGTGCTCAGGTTTATTTTATCTCTCCGCTGATTGAAGAATCTGAGGCTCTAGATTTAAAG
AATGCTGTAGATCTGCAATCTGATTTACAGGCGCATTTTGGAGAGCAAGTTGCAGTGGATTTGTTACACGGTAAGATGAA
GAATGACGAGAAAGATGCCATCATGCAGGCTTTTAAGGAGCGAAAAACGAATATTTTGGTTTCTACCACTGTTATTGAAG
TCGGAGTCAATGTGCCCAATGCAACGGTGATGGTTATTATGGATGCAGATCGTTTTGGTTTAAGCCAATTACATCAGTTG
AGAGGGCGTGTAGGACGTGGTCATAAGCAGTCTTATGCAGTGTTAGTTGCTAATCCTAAAACAGAGTCTGGTAAGGAACG
CATGAAAATTATGACAGAGACGACAGATGGTTTTATTTTGGCTGAAGCAGACTTAAAAATGCGTGGGTCTGGAGAAATAT
TTGGAACTCGTCAATCAGGTTTGCCAGAATTTCAGGTTGCAAATATTATCGAGGACTATCCAATTTTAGAGGAAGCAAGA
CGAGTTGCTAGTCAGATTGTTAGCGTGGAAAATTGGCAGGAGGACCCTAATTGGTCGATTTTGCTTGCTAATTTGAAAGA
TCGAGAGGAATTGGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

72.197

99.554

0.719

  recG/mmsA Streptococcus pneumoniae R36A

72.197

99.554

0.719

  recG Bacillus subtilis subsp. subtilis str. 168

49.085

97.619

0.479

  recG Neisseria meningitidis strain C311

40.337

97.024

0.391