Detailed information NTG0966788

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: MKY23_RS02175
• Genome accession: NZ_CP150221
• Coordinates: 471632..472345 (+)
• Length: 237 a.a.
• NCBI ID: WP_154891459.1
• Uniprot ID: -
• Organism: Paenibacillus sp. FSL R7-0272
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 466632..477345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKY23_RS02150 (MKY23_02150)	-	467299..468555 (+)	1257	WP_339834935.1	DUF445 domain-containing protein	-
MKY23_RS02155 (MKY23_02155)	-	468683..469039 (-)	357	WP_261771711.1	YxeA family protein	-
MKY23_RS02160 (MKY23_02160)	-	469063..469794 (-)	732	WP_339834937.1	ABC transporter permease	-
MKY23_RS02165 (MKY23_02165)	-	469807..470556 (-)	750	WP_090918850.1	ABC transporter permease	-
MKY23_RS02170 (MKY23_02170)	-	470556..471473 (-)	918	WP_154891480.1	ABC transporter ATP-binding protein	-
MKY23_RS02175 (MKY23_02175)	scnR	471632..472345 (+)	714	WP_154891459.1	response regulator transcription factor	Regulator
MKY23_RS02180 (MKY23_02180)	-	472345..473730 (+)	1386	WP_090918846.1	HAMP domain-containing sensor histidine kinase	-
MKY23_RS02185 (MKY23_02185)	-	474007..474189 (+)	183	WP_161556976.1	type A2 lanthipeptide	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 26900.38 Da
• Isoelectric Point: 5.7655

>NTDB_id=966788 MKY23_RS02175 WP_154891459.1 471632..472345(+) (scnR) [Paenibacillus sp. FSL R7-0272]
MDIMKNKKILIVDDEPEIREMIERFLRKEGFFRVYTAGNVAHALAMCRIEKPDAAILDIMLPDGDGFSLLSSIRSFSDMP
VLFLSARGEDEDRLLGLGLGADDYMVKPFLPRELILRLMGILKRVYASNTIERLPVFRLGGLTIDLESAVVHGKGTELPL
TAKEHAILVKLYENQNRIVTSDALCQAVWGDESYGYENTLMVHVRRIREKIEEDPSKPVFLLTVRGLGYKLMTQETR

Nucleotide

• Length: 714 bp

>NTDB_id=966788 MKY23_RS02175 WP_154891459.1 471632..472345(+) (scnR) [Paenibacillus sp. FSL R7-0272]
ATGGACATAATGAAAAACAAGAAAATACTGATTGTAGATGATGAACCGGAAATCCGTGAGATGATCGAACGCTTTTTGCG
TAAGGAGGGCTTTTTCAGAGTCTATACCGCAGGTAATGTGGCCCATGCTCTGGCAATGTGCAGAATAGAGAAGCCGGATG
CAGCCATCCTGGATATCATGTTGCCAGATGGAGACGGATTCTCCTTGTTGTCTTCTATTCGTTCCTTCTCGGACATGCCT
GTGCTATTTTTGTCAGCGCGAGGGGAGGATGAGGATCGTTTACTAGGTTTAGGTTTGGGAGCAGATGATTATATGGTCAA
ACCTTTTCTTCCAAGAGAGCTGATTCTTCGGCTCATGGGCATTTTGAAAAGGGTATACGCTTCCAATACGATAGAAAGAT
TGCCTGTATTTCGTCTAGGTGGATTAACCATTGATTTGGAAAGCGCTGTCGTTCATGGGAAGGGAACAGAACTTCCACTG
ACAGCCAAGGAGCACGCTATACTGGTCAAACTTTATGAGAATCAGAACCGGATTGTAACCAGTGATGCACTATGTCAGGC
CGTTTGGGGAGATGAGAGTTACGGATATGAGAATACCCTAATGGTTCATGTTCGGCGGATTCGGGAGAAAATCGAAGAGG
ACCCGTCTAAACCAGTGTTTCTGTTAACCGTCCGTGGGCTTGGTTATAAACTGATGACTCAGGAGACTCGATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (9-117)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (155-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	51.101	95.781	0.489
micA	Streptococcus pneumoniae Cp1015	41.667	96.203	0.401
vicR	Streptococcus mutans UA159	39.485	98.312	0.388