Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   AABJ90_RS12265 Genome accession   NZ_AP028964
Coordinates   2405274..2407220 (-) Length   648 a.a.
NCBI ID   WP_017694852.1    Uniprot ID   -
Organism   Bacillus subtilis strain NA05 = NBRC 116153     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 2400274..2412220
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABJ90_RS12235 (BsubNA05_23690) yloU 2401936..2402298 (-) 363 WP_003232054.1 Asp23/Gls24 family envelope stress response protein -
  AABJ90_RS12240 (BsubNA05_23700) rpmB 2402575..2402763 (+) 189 WP_003221548.1 50S ribosomal protein L28 -
  AABJ90_RS12245 spoVM 2402836..2402916 (-) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  AABJ90_RS12250 (BsubNA05_23710) thiN 2402988..2403632 (-) 645 WP_014479765.1 thiamine diphosphokinase -
  AABJ90_RS12255 (BsubNA05_23720) rpe 2403705..2404358 (-) 654 WP_003232058.1 ribulose-phosphate 3-epimerase -
  AABJ90_RS12260 (BsubNA05_23730) rsgA 2404363..2405259 (-) 897 WP_003232060.1 ribosome small subunit-dependent GTPase A -
  AABJ90_RS12265 (BsubNA05_23740) stkP 2405274..2407220 (-) 1947 WP_017694852.1 serine/threonine protein kinase PrkC Regulator
  AABJ90_RS12270 (BsubNA05_23750) prpC 2407214..2407978 (-) 765 WP_014479762.1 protein-serine/threonine phosphatase PrpC -
  AABJ90_RS12275 (BsubNA05_23760) rlmN 2407985..2409076 (-) 1092 WP_195727863.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  AABJ90_RS12280 (BsubNA05_23770) rsmB 2409080..2410423 (-) 1344 WP_195727864.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  AABJ90_RS12285 (BsubNA05_23780) fmt 2410410..2411363 (-) 954 WP_046381014.1 methionyl-tRNA formyltransferase -
  AABJ90_RS12290 (BsubNA05_23790) def 2411368..2411850 (-) 483 WP_015383630.1 peptide deformylase -

Sequence

Protein


Download         Length: 648 a.a.        Molecular weight: 71910.59 Da        Isoelectric Point: 4.7871

>NTDB_id=96647 AABJ90_RS12265 WP_017694852.1 2405274..2407220(-) (stkP) [Bacillus subtilis strain NA05 = NBRC 116153]
MLIGKRISGRYQILRVIGGGGMANVYLAEDIILDREVAIKILRFDYANDNEFIRRFRREAQSASSLDHPNIVSIYDLGEE
DDIYYIVMEYVEGMTLKEYITANGPLHPKEALNIMEQIVSAIAHAHQNQIVHRDIKPHNILIDHMGNIKVTDFGIATALS
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGRIPFDGESAVSIALKHLQAETPSAKRWNPSVPQS
VENIILKATAKDPFHRYETAEDMEADIKTAFDADRLNEKRFTIQEDEEMTKAIPIIKDEELAKAAGEKEAEVTTAQENKT
KKNGKRKKWPWVLLTICLVFITAGILAVTVFPSLFMPKDVKIPDVSGMEYEKAAGLLEKEGLQVDSEVLEISDEKIEEGL
MVKTDPKADTTVKEGATVTLYKSTGKTKTEIGDVTGQTVDQAKKALKDQGFKHVTVNEVNDEKNAGTVIDQNPSAGTELV
PSEDQVKLTVSIGPEDITLRDLKTYSKEAASGYLEDNGLKLVEKEAYSDDVPEGQVVKQKPAAGTAVKPGNEVEVTFSLG
PEKKPAKTVKEKVKIPYEPENEGDELQVQIAVDDADHSISDTYEEFKIKEPTERTIELKIEPGQKGYYQVMVNNKVVSYK
TIEYPKDE

Nucleotide


Download         Length: 1947 bp        

>NTDB_id=96647 AABJ90_RS12265 WP_017694852.1 2405274..2407220(-) (stkP) [Bacillus subtilis strain NA05 = NBRC 116153]
GTGCTAATCGGCAAGCGGATCAGCGGGCGTTACCAAATTCTCCGTGTTATAGGCGGCGGGGGAATGGCCAACGTGTATTT
AGCTGAGGATATCATTCTAGACCGTGAAGTCGCAATTAAAATCCTGCGGTTTGACTATGCAAATGACAATGAATTTATCA
GACGTTTCCGCAGAGAAGCCCAATCCGCATCAAGCCTCGATCACCCGAATATTGTCAGCATTTACGATTTGGGCGAGGAA
GATGATATTTATTATATTGTCATGGAATACGTTGAAGGCATGACGCTTAAAGAATACATAACAGCAAATGGGCCGCTTCA
CCCTAAAGAAGCGCTGAACATCATGGAGCAAATTGTCTCAGCCATCGCTCATGCCCATCAAAACCAGATTGTTCACAGAG
ACATCAAGCCGCATAACATTTTGATTGATCATATGGGAAATATCAAAGTAACGGATTTTGGAATTGCGACGGCACTAAGT
TCGACCACAATCACCCATACCAATTCAGTTCTGGGCTCGGTCCATTACTTATCACCTGAACAGGCCCGGGGCGGCTTAGC
CACAAAAAAATCGGATATTTATGCGCTGGGAATCGTTCTATTTGAGCTTTTAACCGGCCGTATTCCGTTTGATGGAGAGT
CAGCAGTCAGCATCGCCTTGAAGCATCTTCAAGCGGAAACTCCTTCGGCAAAAAGGTGGAATCCATCGGTCCCCCAAAGC
GTTGAAAACATCATACTCAAGGCAACTGCCAAAGATCCTTTTCATCGCTACGAAACGGCTGAAGACATGGAAGCAGACAT
AAAAACAGCTTTTGATGCCGACAGACTCAATGAAAAGAGATTTACGATTCAAGAAGATGAAGAAATGACAAAAGCGATAC
CTATCATTAAAGATGAAGAACTCGCTAAAGCTGCTGGCGAAAAAGAAGCTGAAGTGACAACCGCACAAGAAAACAAAACA
AAGAAGAACGGCAAAAGAAAAAAGTGGCCGTGGGTTTTGCTCACGATATGCCTCGTTTTTATCACAGCTGGAATTCTTGC
TGTCACTGTTTTTCCGTCGCTTTTCATGCCTAAGGATGTCAAAATACCTGATGTCTCCGGAATGGAATACGAAAAAGCCG
CAGGGCTCTTGGAAAAAGAAGGTTTACAGGTTGATTCCGAGGTGTTGGAAATCTCAGATGAAAAAATTGAAGAGGGCCTG
ATGGTAAAAACGGACCCTAAAGCGGATACAACAGTCAAAGAAGGCGCCACGGTCACTCTTTATAAAAGCACCGGAAAGAC
AAAAACGGAGATCGGTGATGTGACAGGCCAAACGGTCGACCAGGCAAAAAAAGCGTTGAAGGACCAAGGGTTTAAACATG
TAACGGTAAATGAAGTGAATGACGAGAAAAACGCGGGCACTGTCATTGACCAAAATCCTTCAGCAGGGACTGAGCTTGTC
CCGAGTGAAGATCAAGTCAAACTTACAGTCAGTATCGGACCCGAAGACATTACGCTTAGAGACTTGAAAACCTACAGTAA
AGAAGCAGCGTCTGGATATCTGGAAGACAACGGATTAAAGCTTGTAGAAAAAGAAGCATACTCAGATGATGTTCCAGAAG
GACAGGTTGTCAAACAAAAACCAGCAGCAGGTACGGCAGTAAAGCCGGGAAACGAAGTTGAAGTGACGTTCTCTCTCGGA
CCAGAGAAAAAACCTGCGAAAACAGTGAAAGAAAAGGTCAAGATCCCCTACGAACCAGAAAATGAAGGGGACGAGCTTCA
AGTGCAAATCGCGGTTGACGATGCGGATCACAGCATCTCTGACACTTACGAAGAATTTAAGATAAAAGAGCCGACTGAAC
GAACGATCGAACTAAAGATTGAACCCGGCCAAAAAGGGTACTATCAAGTAATGGTAAACAATAAAGTTGTCAGCTACAAA
ACCATTGAGTATCCGAAAGATGAATAA

Domains

Predicted by InterProScan.

Protein kinase domain (Pkinase)

(11-261)

PASTA domain (PASTA)

(360-423)

PASTA domain (PASTA)

(498-558)

PASTA domain (PASTA)

(430-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

40.517

89.506

0.363
  stkP Streptococcus pneumoniae D39

40.345

89.506

0.361
  stkP Streptococcus pneumoniae R6

40.345

89.506

0.361