Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   NYE32_RS01975 Genome accession   NZ_CP150201
Coordinates   380254..380697 (+) Length   147 a.a.
NCBI ID   WP_002885568.1    Uniprot ID   A0A0A1DW04
Organism   Streptococcus sp. FSL R7-0248     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 375254..385697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE32_RS01960 (NYE32_01960) gdhA 376326..377678 (+) 1353 WP_156685168.1 NADP-specific glutamate dehydrogenase -
  NYE32_RS01965 (NYE32_01965) - 377857..379500 (+) 1644 WP_038676959.1 membrane protein -
  NYE32_RS01970 (NYE32_01970) - 379658..380068 (+) 411 WP_038675386.1 peptide deformylase -
  NYE32_RS01975 (NYE32_01975) rcrR 380254..380697 (+) 444 WP_002885568.1 MarR family transcriptional regulator Regulator
  NYE32_RS01980 (NYE32_01980) rcrP 380701..382515 (+) 1815 WP_151404517.1 ABC transporter ATP-binding protein Regulator
  NYE32_RS01985 (NYE32_01985) rcrQ 382505..384283 (+) 1779 WP_070438405.1 ABC transporter ATP-binding protein Regulator
  NYE32_RS01990 (NYE32_01990) - 384391..385014 (+) 624 WP_048790159.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17181.67 Da        Isoelectric Point: 9.3639

>NTDB_id=966153 NYE32_RS01975 WP_002885568.1 380254..380697(+) (rcrR) [Streptococcus sp. FSL R7-0248]
MHGKDTFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=966153 NYE32_RS01975 WP_002885568.1 380254..380697(+) (rcrR) [Streptococcus sp. FSL R7-0248]
ATGCATGGAAAAGATACTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCTGGCCCTCAAGGATTTGCTGTCAAGTATTTGTCTGACAATCAAGATAAAGAAATCTTTA
TCAAAGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGACAAGGATAAACGCTACAAGTATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCCAAAGAAGATGCTGAAACAGCCTTTCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A1DW04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558

Multiple sequence alignment