Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   NYE32_RS01985 Genome accession   NZ_CP150201
Coordinates   382505..384283 (+) Length   592 a.a.
NCBI ID   WP_070438405.1    Uniprot ID   A0A1F2HLZ5
Organism   Streptococcus sp. FSL R7-0248     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 377505..389283
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE32_RS01965 (NYE32_01965) - 377857..379500 (+) 1644 WP_038676959.1 membrane protein -
  NYE32_RS01970 (NYE32_01970) - 379658..380068 (+) 411 WP_038675386.1 peptide deformylase -
  NYE32_RS01975 (NYE32_01975) rcrR 380254..380697 (+) 444 WP_002885568.1 MarR family transcriptional regulator Regulator
  NYE32_RS01980 (NYE32_01980) rcrP 380701..382515 (+) 1815 WP_151404517.1 ABC transporter ATP-binding protein Regulator
  NYE32_RS01985 (NYE32_01985) rcrQ 382505..384283 (+) 1779 WP_070438405.1 ABC transporter ATP-binding protein Regulator
  NYE32_RS01990 (NYE32_01990) - 384391..385014 (+) 624 WP_048790159.1 GNAT family N-acetyltransferase -
  NYE32_RS01995 (NYE32_01995) - 385162..385785 (+) 624 WP_070438408.1 GTP pyrophosphokinase family protein -
  NYE32_RS02000 (NYE32_02000) - 385787..386464 (+) 678 WP_037601879.1 response regulator transcription factor -
  NYE32_RS02005 (NYE32_02005) - 386478..387701 (+) 1224 WP_156685167.1 HAMP domain-containing sensor histidine kinase -
  NYE32_RS02010 (NYE32_02010) pyrH 387938..388675 (+) 738 WP_002885551.1 UMP kinase -
  NYE32_RS02015 (NYE32_02015) frr 388690..389247 (+) 558 WP_002885567.1 ribosome recycling factor -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65146.16 Da        Isoelectric Point: 5.0198

>NTDB_id=966155 NYE32_RS01985 WP_070438405.1 382505..384283(+) (rcrQ) [Streptococcus sp. FSL R7-0248]
MENKPKTSSYKRLKPYIKGFQIPFVLAIFGAIISAVITVIGPDKLKEITNTITEGITPTKMGTIPGIDLDKVASIAMTLA
VLYAISAIVGYLQSFTVATVTQRFSQRFRTAIQKKINSVPLNYFDSHSQGDTLSRVTNDVDLLGQSLSQGLGTLITSSVL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNAAQESSQAFKG
LNDKLYKSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKDMDDESAKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDQGRITIDGVDTNDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIAAAKAVGIHHFITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTCFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAADGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=966155 NYE32_RS01985 WP_070438405.1 382505..384283(+) (rcrQ) [Streptococcus sp. FSL R7-0248]
ATGGAAAATAAGCCAAAAACATCATCCTATAAACGCTTAAAACCCTATATTAAAGGTTTCCAAATTCCGTTTGTCCTTGC
GATTTTTGGAGCAATTATTTCAGCGGTCATTACAGTTATTGGACCAGATAAGCTTAAAGAAATTACCAATACTATAACTG
AAGGTATTACACCTACTAAAATGGGAACGATTCCAGGCATTGATTTGGACAAGGTAGCAAGTATTGCTATGACCTTGGCT
GTTCTCTATGCCATTTCAGCCATTGTGGGTTACCTACAAAGCTTTACGGTTGCGACAGTTACACAACGCTTTTCACAACG
TTTCCGTACAGCTATCCAAAAGAAAATCAACAGTGTCCCTCTTAATTATTTCGACAGTCACTCTCAAGGGGATACCCTCT
CTCGTGTGACCAATGACGTTGACCTTTTGGGACAATCGCTTAGCCAAGGCTTAGGTACCTTGATTACTTCAAGTGTTCTC
TTGGTGGCAGCCATTATTATGATGTTCTACTCAAATGTCACTATGGCTTTCACTGCGATTGGTTCTGTCTTGATAGGTTT
TGTTCTGGTAGCCTTCATCATGGGCTTCTCGCAACCCCTTTTCAAGCGCCAACAAGAAAATTTGGCTAATATTAATGGTT
ATATTGAAGAAATCTACACGGGTCAAGCAGTCGTAACGAGTTACAATGCTGCTCAAGAAAGTAGTCAAGCTTTCAAGGGA
CTTAATGATAAACTCTATAAATCAATGTGGCAATCACAGTTTATCTCAGGTATTATGATGCCACTTATGATTTTCATTGG
GAACTTTGGTTATGTCATGGTCTGTCTTGTGGGTGCCATCAAAGTTATTGATGGTAGCTTGACTATTGGTGATGTGGTAG
CCTTCATGACCTATGTTCGCATCTTCTCACAACCTCTTTCTCAAATTGCACAAGGGATTACACAACTCCAATCAGCCACT
GCAGCCATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAGATATGGACGACGAGTCAGCTAAGACAGCTGAATTGACAGA
TACTAAAGGTCAAGTTGTCTTTGATCATGTTTCCTTTGGTTATACTCCTGAAAAGACTATTATTCATGACTTTTCGGCTC
TTGCTAAGCCAGGTCAAAAGATTGCGATCGTTGGTCCGACGGGTGCTGGTAAGACGACTATTGTTAACCTGCTTATGAAG
TTCTATAACATCGACCAAGGTCGTATTACCATTGACGGTGTGGATACGAATGACATGAAGCGTGAAACTGTTCATGACCA
ATTCTCAATGGTGCTTCAAGACACTTGGCTCTTTGAAGGTACTATTCGTGATAATTTGATTTACAACCAAGAGAATATTT
CTGATGAGCAAGTTATTGCTGCAGCCAAGGCCGTCGGTATTCACCACTTCATTACCACACTTCCAAAGGGTTATGATACT
TATTTGGATGATTCTGTGACCTTATCAGTTGGACAGAAGCAGCTCTTGACCATTGCACGTGCGCTTCTTAAGGATGCCCC
TCTCCTTATCTTGGATGAGGCGACATCATCTGTCGACACTCGAACAGAAGAATTGATTCAAAAAGCCATGGACAAGCTTA
TGGAAGGTCGTACTTGCTTTGTTATTGCCCACCGCTTATCAACCATTCGAAATGCTGACCTTATCCTTGTGATGAAAGAT
GGTAACATTATTGAACAGGGCAATCATGATGAGCTCATGGCAGCAGATGGTTTCTATGCTGATCTTTATAATAGTCAATT
TACAGAAGAAGTTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(371-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1F2HLZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

68.75

100

0.688

Multiple sequence alignment