Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   NYE32_RS01980 Genome accession   NZ_CP150201
Coordinates   380701..382515 (+) Length   604 a.a.
NCBI ID   WP_151404517.1    Uniprot ID   -
Organism   Streptococcus sp. FSL R7-0248     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 375701..387515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE32_RS01960 (NYE32_01960) gdhA 376326..377678 (+) 1353 WP_156685168.1 NADP-specific glutamate dehydrogenase -
  NYE32_RS01965 (NYE32_01965) - 377857..379500 (+) 1644 WP_038676959.1 membrane protein -
  NYE32_RS01970 (NYE32_01970) - 379658..380068 (+) 411 WP_038675386.1 peptide deformylase -
  NYE32_RS01975 (NYE32_01975) rcrR 380254..380697 (+) 444 WP_002885568.1 MarR family transcriptional regulator Regulator
  NYE32_RS01980 (NYE32_01980) rcrP 380701..382515 (+) 1815 WP_151404517.1 ABC transporter ATP-binding protein Regulator
  NYE32_RS01985 (NYE32_01985) rcrQ 382505..384283 (+) 1779 WP_070438405.1 ABC transporter ATP-binding protein Regulator
  NYE32_RS01990 (NYE32_01990) - 384391..385014 (+) 624 WP_048790159.1 GNAT family N-acetyltransferase -
  NYE32_RS01995 (NYE32_01995) - 385162..385785 (+) 624 WP_070438408.1 GTP pyrophosphokinase family protein -
  NYE32_RS02000 (NYE32_02000) - 385787..386464 (+) 678 WP_037601879.1 response regulator transcription factor -

Sequence


Protein


Download         Length: 604 a.a.        Molecular weight: 67041.72 Da        Isoelectric Point: 6.1418

>NTDB_id=966154 NYE32_RS01980 WP_151404517.1 380701..382515(+) (rcrP) [Streptococcus sp. FSL R7-0248]
MFKIFKRLTTKELIMIVLAVIFVCLNVYLNLKIPDYMSDITTLLSTKGTKASDIFAWNTDAPGMRMLLMSFAGFMASVVV
GFLAARTAASFTTRLRDDIFHQVLDFSDAEIKKFSIPSLLTRTTNDITQLQMVLTMGLQVITQGPIMAIWAITKIADKNG
NWLLALLVAVAVIAILMLFLLIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEDKFEKANTDLTQNNLFIG
RSFALLTPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKIAGAMENKVHLFSDMVVYSSYAMQVVMGFMMMIVVFFLLP
RAVVAAGRINEVLDTQSSVSYPENSSEKPKEVGTVEFDDVSFRYSETSEPVLEHVSFKAKKGDTVAFIGSTGSGKSTLVN
LIPRFYDATQGTIKVDGVDVRHYDHETLHNIVGYIPQKAVLFSGDITSNMTMGTSNNSPLDDAKIWEALELAQGKDFVEN
KEGQLKAEVAQAGSNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRKLRQELAEKTQDMTKLIVAQRISTIMDA
DQILVLDQGKVVGQGTHKELLANNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=966154 NYE32_RS01980 WP_151404517.1 380701..382515(+) (rcrP) [Streptococcus sp. FSL R7-0248]
ATGTTTAAAATTTTTAAACGTTTGACGACAAAAGAGTTAATCATGATTGTCTTAGCGGTGATTTTTGTTTGCTTGAACGT
CTATCTAAACTTGAAAATTCCAGACTATATGTCTGATATTACGACACTCTTATCAACTAAGGGAACTAAAGCGTCGGATA
TTTTTGCCTGGAATACAGATGCTCCAGGGATGCGAATGCTTTTAATGTCGTTTGCAGGCTTTATGGCCTCTGTAGTTGTT
GGTTTCTTAGCTGCCAGAACAGCGGCAAGTTTTACCACCCGCCTTCGTGATGATATCTTCCATCAGGTTCTAGATTTTTC
GGACGCAGAGATCAAGAAATTCTCAATTCCTAGTCTTTTGACCCGTACGACAAATGATATTACCCAATTGCAGATGGTAC
TTACCATGGGGTTACAGGTTATTACACAGGGACCTATCATGGCCATTTGGGCGATTACAAAGATTGCCGATAAAAATGGA
AATTGGCTCCTTGCCTTGCTTGTCGCTGTGGCAGTGATTGCCATTCTCATGCTTTTCCTCTTGATTATGGTTATGCCTAA
GCAACGCTTGATTCAAACTCTGACCGATAAACTGAATAGCGTAACGCGTGAATCTCTTACAGGAATTCGTGTGGTGCGTG
CCTATAACGCCGAAAGTTATCAAGAGGATAAATTTGAAAAGGCCAATACTGATTTGACCCAAAACAATCTCTTTATCGGT
CGTTCTTTTGCCTTACTGACACCCGTGATGACTGCTGTATCAAGTGGTTTGACACTGGCTATTTATTGGATTGGTGCACA
TTTGATTGAAGATGTTAAGATTCCAACAGATCCAACTAAGATTGCTGGTGCTATGGAAAATAAGGTCCATCTCTTCTCAG
ACATGGTGGTTTATTCATCTTATGCCATGCAGGTTGTGATGGGATTCATGATGATGATTGTTGTTTTCTTCCTTCTTCCA
CGTGCAGTTGTAGCAGCTGGTCGTATCAATGAAGTTCTAGATACCCAATCTTCAGTCTCTTATCCTGAAAATAGTTCTGA
AAAACCTAAAGAAGTGGGTACTGTCGAATTTGATGATGTTTCCTTCCGTTATTCTGAAACTTCAGAGCCTGTTTTGGAGC
ATGTTAGCTTCAAAGCTAAAAAAGGTGACACGGTGGCCTTTATTGGTTCGACTGGATCTGGTAAATCAACGCTTGTCAAC
CTTATCCCACGTTTTTATGATGCCACGCAAGGAACCATCAAGGTTGACGGTGTCGATGTGCGACATTATGACCATGAAAC
CTTGCACAATATAGTCGGTTATATTCCACAGAAGGCAGTGCTTTTCTCAGGTGATATTACGTCAAATATGACGATGGGAA
CGAGCAATAACAGTCCCCTTGATGATGCTAAGATTTGGGAAGCTCTCGAATTGGCTCAAGGAAAAGACTTTGTTGAAAAT
AAAGAAGGTCAACTTAAAGCAGAAGTTGCCCAAGCCGGGTCTAACTTCTCAGGTGGACAGAAACAACGTTTGGCTATTGC
GCGTGCCTTGGCACGTAAGCCTGAAATCTTGATTTTCGATGATTCCTTCTCAGCCTTGGACTATAAGACCGATCGTAAGT
TACGTCAAGAATTGGCTGAAAAAACACAAGATATGACCAAGTTGATTGTAGCTCAACGTATCTCTACTATTATGGATGCA
GACCAAATCTTGGTACTTGATCAAGGTAAGGTCGTTGGTCAAGGAACTCACAAGGAACTCTTGGCAAATAATGAGGTTTA
CCAAGAAATTGCCTATTCACAATTGTCTAAGGAGGAGTTAGAAAATGGAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.264

100

0.684


Multiple sequence alignment