Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   NSQ79_RS07005 Genome accession   NZ_CP150200
Coordinates   1537027..1538028 (-) Length   333 a.a.
NCBI ID   WP_014634136.1    Uniprot ID   A0A1V0H5P5
Organism   Streptococcus sp. FSL W7-1342     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1532027..1543028
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ79_RS06985 (NSQ79_06985) eno 1532776..1534080 (-) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  NSQ79_RS06990 (NSQ79_06990) - 1534286..1534741 (+) 456 WP_339313428.1 YueI family protein -
  NSQ79_RS06995 (NSQ79_06995) - 1534772..1535887 (-) 1116 WP_339313429.1 glycerate kinase -
  NSQ79_RS07000 (NSQ79_07000) - 1535900..1536967 (-) 1068 WP_339313431.1 MmcQ/YjbR family DNA-binding protein -
  NSQ79_RS07005 (NSQ79_07005) ccpA 1537027..1538028 (-) 1002 WP_014634136.1 catabolite control protein A Regulator
  NSQ79_RS07010 (NSQ79_07010) - 1538341..1539423 (+) 1083 WP_339313433.1 Xaa-Pro peptidase family protein -
  NSQ79_RS07015 (NSQ79_07015) - 1539520..1539888 (-) 369 WP_002886108.1 S1 RNA-binding domain-containing protein -
  NSQ79_RS07020 (NSQ79_07020) - 1539890..1541296 (-) 1407 WP_021144483.1 Cof-type HAD-IIB family hydrolase -
  NSQ79_RS07025 (NSQ79_07025) smpB 1541443..1541907 (-) 465 WP_002885905.1 SsrA-binding protein SmpB -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36646.55 Da        Isoelectric Point: 5.4827

>NTDB_id=966110 NSQ79_RS07005 WP_014634136.1 1537027..1538028(-) (ccpA) [Streptococcus sp. FSL W7-1342]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGITLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=966110 NSQ79_RS07005 WP_014634136.1 1537027..1538028(-) (ccpA) [Streptococcus sp. FSL W7-1342]
ATGAATACTGATGAAACAATTACTATATACGACGTTGCGCGTGAAGCAGGTGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTTATTCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCTACGATGTACAAGTACAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCATGAAGTTACCGTGATTAACTCTCTATTTGCCAAACAAGTAGACGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACCCGTACGCCGATTGTTCTAGCAGGAACAGTAGACCTCGAACACCAATTACCGAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTCTGTAACGCAGCTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCTGGACTTGAAAAGAATAATTTGCGCT
ACAATGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGATTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGGGAAGATGAATTGGCTGCGGGTCTCTTGAATGGCCTCTTTGCTGCAGGTAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTACACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAGCTTGAAGAAAAAGATGTT
ATTCTTAATCACGGTATTACCTTACGTCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0H5P5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment