Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   NSQ79_RS02105 Genome accession   NZ_CP150200
Coordinates   398111..398554 (+) Length   147 a.a.
NCBI ID   WP_164332300.1    Uniprot ID   A0AAW7PMD3
Organism   Streptococcus sp. FSL W7-1342     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 393111..403554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ79_RS02090 (NSQ79_02090) gdhA 394180..395532 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  NSQ79_RS02095 (NSQ79_02095) - 395711..397354 (+) 1644 WP_049529163.1 membrane protein -
  NSQ79_RS02100 (NSQ79_02100) - 397513..397923 (+) 411 WP_339313770.1 peptide deformylase -
  NSQ79_RS02105 (NSQ79_02105) rcrR 398111..398554 (+) 444 WP_164332300.1 MarR family transcriptional regulator Regulator
  NSQ79_RS02110 (NSQ79_02110) rcrP 398558..400372 (+) 1815 WP_061652402.1 ABC transporter ATP-binding protein Regulator
  NSQ79_RS02115 (NSQ79_02115) rcrQ 400362..402140 (+) 1779 WP_339313772.1 ABC transporter ATP-binding protein Regulator
  NSQ79_RS02120 (NSQ79_02120) - 402248..402871 (+) 624 WP_002886697.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17193.72 Da        Isoelectric Point: 9.3639

>NTDB_id=966083 NSQ79_RS02105 WP_164332300.1 398111..398554(+) (rcrR) [Streptococcus sp. FSL W7-1342]
MHGKDTFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAEIAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=966083 NSQ79_RS02105 WP_164332300.1 398111..398554(+) (rcrR) [Streptococcus sp. FSL W7-1342]
ATGCATGGAAAAGATACTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCTGGCCCGCAAGGATTTGCCGTCAAGTATTTGTCTGACAATCAAGATAAAGAAATCTTTA
TCAAAGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGACAAGGATAAACGCTACAAGTATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCCAAAGAAGATGCTGAAATAGCTTTCCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558

Multiple sequence alignment