Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   NSQ79_RS02115 Genome accession   NZ_CP150200
Coordinates   400362..402140 (+) Length   592 a.a.
NCBI ID   WP_339313772.1    Uniprot ID   -
Organism   Streptococcus sp. FSL W7-1342     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 395362..407140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ79_RS02095 (NSQ79_02095) - 395711..397354 (+) 1644 WP_049529163.1 membrane protein -
  NSQ79_RS02100 (NSQ79_02100) - 397513..397923 (+) 411 WP_339313770.1 peptide deformylase -
  NSQ79_RS02105 (NSQ79_02105) rcrR 398111..398554 (+) 444 WP_164332300.1 MarR family transcriptional regulator Regulator
  NSQ79_RS02110 (NSQ79_02110) rcrP 398558..400372 (+) 1815 WP_061652402.1 ABC transporter ATP-binding protein Regulator
  NSQ79_RS02115 (NSQ79_02115) rcrQ 400362..402140 (+) 1779 WP_339313772.1 ABC transporter ATP-binding protein Regulator
  NSQ79_RS02120 (NSQ79_02120) - 402248..402871 (+) 624 WP_002886697.1 GNAT family N-acetyltransferase -
  NSQ79_RS02125 (NSQ79_02125) - 403019..403642 (+) 624 WP_049529160.1 GTP pyrophosphokinase family protein -
  NSQ79_RS02130 (NSQ79_02130) - 403644..404321 (+) 678 WP_084871162.1 response regulator transcription factor -
  NSQ79_RS02135 (NSQ79_02135) - 404335..405558 (+) 1224 WP_049529158.1 HAMP domain-containing sensor histidine kinase -
  NSQ79_RS02140 (NSQ79_02140) pyrH 405796..406533 (+) 738 WP_002885551.1 UMP kinase -
  NSQ79_RS02145 (NSQ79_02145) frr 406548..407105 (+) 558 WP_002885567.1 ribosome recycling factor -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65132.12 Da        Isoelectric Point: 5.0198

>NTDB_id=966085 NSQ79_RS02115 WP_339313772.1 400362..402140(+) (rcrQ) [Streptococcus sp. FSL W7-1342]
MENKPKTSSYKRLKPYIKGFQIPFVLAIFGAIISAVITVIGSDKLKEITNTITEGITPTKMGTIPGIDLDKVASIAMTLA
VLYAISAIVGYLQSFTVATVTQRFSQRFRTAIQKKINSVPLNYFDSHSQGDTLSRVTNDVDLLGQSLSQGLGTLITSSVL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNAAQESSQAFKG
LNDKLYKSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGILTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKDMDDESAKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDQGRITIDGVDTNDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIAAAKAVGVHHFITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAADGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=966085 NSQ79_RS02115 WP_339313772.1 400362..402140(+) (rcrQ) [Streptococcus sp. FSL W7-1342]
ATGGAAAATAAGCCAAAAACATCATCCTATAAACGCTTAAAACCCTATATTAAAGGTTTCCAAATTCCGTTTGTCCTTGC
GATTTTTGGAGCAATTATTTCAGCGGTCATTACAGTTATTGGATCAGATAAGCTTAAAGAAATTACCAATACTATTACTG
AAGGGATTACACCTACTAAAATGGGGACAATTCCAGGTATTGATTTGGACAAGGTAGCAAGTATTGCTATGACCTTGGCT
GTTCTCTATGCCATTTCAGCGATTGTTGGTTACTTACAAAGCTTTACGGTTGCGACAGTTACACAACGCTTTTCACAACG
TTTCCGTACAGCTATCCAAAAGAAAATCAATAGTGTTCCTCTTAATTATTTTGATAGTCACTCTCAAGGGGATACCCTCT
CTCGTGTGACCAATGACGTTGACCTTTTGGGACAATCGCTTAGTCAAGGTTTAGGTACCTTGATTACTTCAAGTGTTCTC
TTGGTGGCAGCCATTATTATGATGTTCTACTCAAATGTCACTATGGCTTTCACTGCGATTGGTTCTGTCTTGATAGGTTT
TGTTCTGGTAGCCTTCATCATGGGCTTCTCGCAACCCCTTTTCAAACGCCAACAAGAAAATTTGGCTAATATTAATGGTT
ATATTGAAGAAATCTACACGGGTCAAGCAGTCGTAACGAGTTACAATGCTGCTCAAGAAAGCAGTCAAGCTTTCAAGGGA
CTTAATGATAAACTCTATAAATCGATGTGGCAATCACAGTTTATCTCAGGTATTATGATGCCACTTATGATTTTCATTGG
GAACTTTGGTTATGTTATGGTCTGTCTTGTGGGTGCCATCAAAGTTATTGATGGTATCTTGACGATTGGTGATGTGGTAG
CCTTCATGACCTATGTTCGTATCTTCTCCCAACCTCTTTCTCAAATTGCACAAGGGATTACACAACTCCAATCAGCTACT
GCAGCCATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAGATATGGACGACGAGTCAGCTAAGACAGCTGAGTTGACAGA
TACTAAAGGTCAAGTAGTCTTTGATCATGTTTCCTTTGGTTATACTCCTGAAAAGACTATTATTCATGACTTTTCAGCCC
TTGCTAAGCCAGGTCAAAAGATTGCGATCGTTGGTCCAACAGGTGCTGGTAAGACGACTATTGTTAACCTGCTTATGAAG
TTCTATAACATCGACCAAGGTCGTATTACCATTGACGGTGTGGATACTAATGACATGAAACGTGAAACCGTTCATGATCA
ATTCTCTATGGTGCTTCAAGACACTTGGCTCTTTGAAGGTACTATTCGTGATAATTTGATTTACAACCAAGAGAATATTT
CTGATGAGCAAGTTATTGCTGCAGCTAAGGCTGTCGGTGTTCACCACTTCATCACCACACTTCCAAAGGGGTATGATACT
TATTTGGATGATTCTGTGACCTTATCAGTTGGTCAGAAACAGCTCTTGACCATTGCGCGTGCGCTTCTTAAGGACGCCCC
TCTTCTTATCTTGGATGAAGCGACATCATCAGTTGACACCCGAACAGAAGAATTGATTCAAAAAGCCATGGACAAGCTTA
TGGAAGGTCGGACTTCCTTTGTCATTGCCCACCGCTTATCAACCATTCGAAATGCTGACCTTATTCTTGTGATGAAAGAT
GGTAACATTATTGAACAGGGCAATCATGATGAGCTCATGGCAGCAGATGGTTTCTATGCTGATCTTTATAATAGTCAATT
TACAGAAGAAGTTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(371-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

68.919

100

0.689

Multiple sequence alignment