Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   NSQ79_RS02110 Genome accession   NZ_CP150200
Coordinates   398558..400372 (+) Length   604 a.a.
NCBI ID   WP_061652402.1    Uniprot ID   A0A6G4NCL0
Organism   Streptococcus sp. FSL W7-1342     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 393558..405372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ79_RS02090 (NSQ79_02090) gdhA 394180..395532 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  NSQ79_RS02095 (NSQ79_02095) - 395711..397354 (+) 1644 WP_049529163.1 membrane protein -
  NSQ79_RS02100 (NSQ79_02100) - 397513..397923 (+) 411 WP_339313770.1 peptide deformylase -
  NSQ79_RS02105 (NSQ79_02105) rcrR 398111..398554 (+) 444 WP_164332300.1 MarR family transcriptional regulator Regulator
  NSQ79_RS02110 (NSQ79_02110) rcrP 398558..400372 (+) 1815 WP_061652402.1 ABC transporter ATP-binding protein Regulator
  NSQ79_RS02115 (NSQ79_02115) rcrQ 400362..402140 (+) 1779 WP_339313772.1 ABC transporter ATP-binding protein Regulator
  NSQ79_RS02120 (NSQ79_02120) - 402248..402871 (+) 624 WP_002886697.1 GNAT family N-acetyltransferase -
  NSQ79_RS02125 (NSQ79_02125) - 403019..403642 (+) 624 WP_049529160.1 GTP pyrophosphokinase family protein -
  NSQ79_RS02130 (NSQ79_02130) - 403644..404321 (+) 678 WP_084871162.1 response regulator transcription factor -

Sequence


Protein


Download         Length: 604 a.a.        Molecular weight: 67033.72 Da        Isoelectric Point: 6.1418

>NTDB_id=966084 NSQ79_RS02110 WP_061652402.1 398558..400372(+) (rcrP) [Streptococcus sp. FSL W7-1342]
MFKIFKRLTTKELIMIVLVVIFVCLNVYLNLKIPDYMSDITTLLSTKGTKASDIFSWNTDAPGMRMLLMSFAGFMASVVV
GFLAARTAASFTTRLRDDIFHQVLDFSDAEIKKFSIPSLLTRTTNDITQLQLVLTMGLQVITQGPIMAIWAITKIADKNG
NWLLALLVAVAVIAILMLFLLIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEDKFEKANTDLTQNNLFIG
RSLALLTPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKIAGAMENKVHLFSDMVVYSSYAMQVVMGFMMMIVVFFLLP
RAVVAAGRINEVLDTQSSVSYPENSSEKPKEVGTVEFDDVSFRYSETSEPVLEHVSFKAKKGDTVAFIGSTGSGKSTLVN
LIPRFYDATQGTIKVDGVDVRHYDHETLHNIVGYIPQKAVLFSGDITSNMTMGTSNNSPLDDAKIWEALELAQGKDFVEN
KEGQLKAEVAQAGSNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRKLRQELAEKTQDMTKLIVAQRISTIMDA
DQILVLDQGKVVGQGTHKELLANNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=966084 NSQ79_RS02110 WP_061652402.1 398558..400372(+) (rcrP) [Streptococcus sp. FSL W7-1342]
ATGTTTAAAATTTTTAAACGTTTGACGACAAAAGAGTTAATCATGATTGTCTTAGTGGTGATTTTTGTTTGCTTGAACGT
CTATCTAAACTTGAAAATTCCAGACTATATGTCTGATATTACGACACTCTTATCAACTAAGGGAACTAAAGCGTCGGATA
TTTTTTCCTGGAATACAGATGCCCCAGGGATGCGAATGCTTTTAATGTCATTTGCAGGCTTTATGGCCTCTGTAGTTGTT
GGTTTCTTAGCTGCCAGAACAGCGGCAAGTTTTACCACCCGTCTTCGTGATGATATCTTCCATCAGGTTCTAGATTTTTC
GGATGCTGAGATTAAGAAATTCTCAATTCCTAGTCTTTTGACCCGTACGACAAATGATATTACCCAATTGCAGCTGGTAC
TTACCATGGGGTTACAGGTTATTACACAGGGGCCTATCATGGCCATTTGGGCGATTACAAAGATTGCCGATAAAAATGGG
AACTGGCTCCTTGCCTTGCTTGTCGCTGTGGCAGTGATTGCCATTCTCATGCTCTTCCTCTTGATTATGGTTATGCCTAA
GCAACGCTTGATTCAAACTCTGACCGATAAACTGAATAGCGTAACGCGTGAATCTCTTACTGGAATTCGTGTGGTGCGTG
CCTATAACGCCGAAAGTTATCAAGAGGATAAATTTGAAAAGGCCAATACTGATTTGACCCAAAACAATCTCTTTATCGGT
CGTTCTTTGGCCTTACTGACACCGGTAATGACTGCTGTATCAAGTGGTTTGACACTGGCTATTTATTGGATTGGTGCGCA
TTTGATTGAAGATGTTAAGATTCCAACAGATCCAACTAAGATTGCTGGTGCCATGGAAAATAAGGTCCATCTCTTCTCAG
ACATGGTGGTTTATTCATCTTATGCCATGCAGGTTGTTATGGGATTCATGATGATGATTGTTGTTTTCTTCCTTCTTCCA
CGTGCAGTTGTAGCAGCTGGTCGTATCAATGAAGTTCTAGATACCCAATCTTCAGTCTCTTATCCTGAAAATAGTTCTGA
AAAACCTAAAGAAGTGGGTACTGTCGAATTTGATGATGTTTCCTTCCGTTATTCTGAAACTTCAGAGCCTGTTTTAGAGC
ATGTTAGTTTCAAAGCTAAAAAAGGTGACACGGTTGCCTTTATTGGTTCGACTGGATCTGGTAAATCAACGCTTGTCAAC
CTTATCCCACGTTTTTATGATGCCACGCAAGGAACAATCAAGGTTGACGGAGTAGATGTGCGACATTACGACCATGAAAC
CTTGCACAATATAGTCGGTTATATTCCACAGAAGGCTGTGCTTTTCTCAGGTGATATCACGTCAAATATGACGATGGGAA
CGAGCAATAACAGTCCCCTTGATGATGCTAAGATTTGGGAAGCCCTTGAATTGGCTCAAGGAAAAGACTTTGTTGAAAAT
AAAGAAGGTCAACTTAAAGCAGAAGTTGCCCAAGCTGGGTCTAACTTCTCAGGTGGACAGAAGCAACGTTTGGCTATTGC
GCGTGCCTTGGCACGTAAGCCTGAAATCTTGATTTTCGATGATTCCTTCTCAGCCTTGGACTATAAGACCGATCGTAAGT
TACGTCAAGAATTGGCTGAAAAAACACAAGATATGACCAAGTTGATTGTTGCCCAACGTATCTCTACTATTATGGATGCG
GACCAAATCTTGGTACTTGACCAAGGTAAGGTCGTTGGTCAAGGGACTCACAAGGAACTCTTGGCAAATAATGAGGTTTA
CCAAGAAATTGCCTATTCACAATTGTCTAAGGAGGAGTTAGAAAATGGAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6G4NCL0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.264

100

0.684


Multiple sequence alignment