Detailed information NTG0096604

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: AABJ90_RS07120
• Genome accession: NZ_AP028964
• Coordinates: 1397929..1398534 (+)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain NA05 = NBRC 116153
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1392929..1403534

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ90_RS07080 (BsubNA05_13640)	-	1393093..1393233 (-)	141	WP_004398683.1	hypothetical protein	-
AABJ90_RS07085 (BsubNA05_13650)	-	1393240..1393608 (-)	369	WP_257724450.1	DUF5412 domain-containing protein	-
AABJ90_RS07090	-	1393612..1393686 (-)	75	Protein_1385	hypothetical protein	-
AABJ90_RS07095 (BsubNA05_13660)	-	1393771..1393893 (+)	123	WP_003229707.1	hypothetical protein	-
AABJ90_RS07100 (BsubNA05_13670)	yrzF	1393939..1394586 (-)	648	WP_015251558.1	phosphotransferase	-
AABJ90_RS07105 (BsubNA05_13680)	iolG	1394824..1395852 (+)	1029	WP_015251559.1	inositol 2-dehydrogenase	-
AABJ90_RS07110 (BsubNA05_13690)	csbX	1395923..1397230 (+)	1308	WP_003246197.1	MFS transporter	-
AABJ90_RS07115 (BsubNA05_13700)	bofC	1397278..1397790 (+)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
AABJ90_RS07120 (BsubNA05_13710)	ruvA	1397929..1398534 (+)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
AABJ90_RS07125 (BsubNA05_13720)	ruvB	1398545..1399549 (+)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
AABJ90_RS07130 (BsubNA05_13730)	yrzS	1399542..1399742 (+)	201	WP_003222669.1	DUF2905 domain-containing protein	-
AABJ90_RS07135 (BsubNA05_13740)	queA	1399772..1400800 (+)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
AABJ90_RS07140 (BsubNA05_13750)	tgt	1400827..1401972 (+)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
AABJ90_RS07145 (BsubNA05_13760)	yajC	1402009..1402275 (+)	267	WP_004398708.1	preprotein translocase subunit YajC	-
AABJ90_RS07150 (BsubNA05_13770)	-	1402332..1402721 (-)	390	WP_004398667.1	TIGR04086 family membrane protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=96604 AABJ90_RS07120 WP_003229717.1 1397929..1398534(+) (ruvA) [Bacillus subtilis strain NA05 = NBRC 116153]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=96604 AABJ90_RS07120 WP_003229717.1 1397929..1398534(+) (ruvA) [Bacillus subtilis strain NA05 = NBRC 116153]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408