Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NST56_RS16955 Genome accession   NZ_CP150195
Coordinates   3207355..3209655 (-) Length   766 a.a.
NCBI ID   WP_339177936.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0560     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3202355..3214655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST56_RS16915 (NST56_16915) - 3202823..3203254 (+) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -
  NST56_RS16920 (NST56_16920) - 3203254..3203595 (+) 342 WP_010331684.1 Na(+)/H(+) antiporter subunit C -
  NST56_RS16925 (NST56_16925) - 3203588..3205069 (+) 1482 WP_326334359.1 Na+/H+ antiporter subunit D -
  NST56_RS16930 (NST56_16930) - 3205075..3205551 (+) 477 WP_010331686.1 Na+/H+ antiporter subunit E -
  NST56_RS16935 (NST56_16935) - 3205551..3205835 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  NST56_RS16940 (NST56_16940) mnhG 3205819..3206193 (+) 375 WP_010331688.1 monovalent cation/H(+) antiporter subunit G -
  NST56_RS16945 (NST56_16945) - 3206232..3206612 (-) 381 WP_339177933.1 hotdog fold thioesterase -
  NST56_RS16950 (NST56_16950) comA 3206630..3207274 (-) 645 WP_010331690.1 two-component system response regulator ComA Regulator
  NST56_RS16955 (NST56_16955) comP 3207355..3209655 (-) 2301 WP_339177936.1 histidine kinase Regulator
  NST56_RS16960 (NST56_16960) comX 3209667..3209831 (-) 165 WP_268471515.1 competence pheromone ComX -
  NST56_RS16965 (NST56_16965) - 3209844..3210704 (-) 861 WP_268471516.1 polyprenyl synthetase family protein -
  NST56_RS16970 (NST56_16970) degQ 3210889..3211029 (-) 141 WP_010331694.1 degradation enzyme regulation protein DegQ Regulator
  NST56_RS16975 (NST56_16975) - 3211490..3211858 (+) 369 WP_010331695.1 hypothetical protein -
  NST56_RS16980 (NST56_16980) - 3211834..3213063 (-) 1230 WP_010331696.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88504.67 Da        Isoelectric Point: 8.0607

>NTDB_id=965871 NST56_RS16955 WP_339177936.1 3207355..3209655(-) (comP) [Bacillus sp. FSL R5-0560]
MRAWYNKVSIFLILVSLVYVTYLTYISSSKLLVGAAVAKNHDNEVVVTDIEEFSTAYYSGLQKGDVIKSINNHKVKRPLE
VQKYNSNHVTSIVVERDGEKVKVKPDLMNDGNFSTFIIPLIFYIACLFCCFFVLKINESKKLFSALILIIFLLSASLAYL
SAGGSAKGDLLSRCIMVFTLTSVMLNYLLFLYQYFKELGTVLFNKKVFILYSIPFLNLVFELFRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLGTDGISSFLAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELMGSPAGDYYYFRLAILMYIIMVAVFYYKEVLDFRFRLKRVSEKFNYQ
DSIYKFTQLIRDSISLNQVFEELKNTILEVSLVSRAHVYEVSADGSIKLYNGEPVNSFEKVYQKEFRKVTPEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDGVGF
DQEKTNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=965871 NST56_RS16955 WP_339177936.1 3207355..3209655(-) (comP) [Bacillus sp. FSL R5-0560]
ATGAGGGCATGGTACAACAAAGTTTCAATTTTTTTAATTTTAGTAAGTTTAGTCTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCCAAAAACCATGACAATGAAGTCGTGGTAACAGACATTGAGGAATTCT
CTACGGCTTACTATTCTGGATTACAAAAAGGGGACGTTATTAAAAGTATTAATAATCATAAAGTTAAACGTCCTCTTGAA
GTTCAGAAATATAATTCAAACCATGTGACTTCAATTGTTGTCGAGAGGGATGGAGAAAAGGTTAAAGTTAAGCCTGATTT
AATGAATGATGGGAATTTTTCTACTTTTATAATCCCACTAATATTTTATATAGCTTGTCTATTTTGTTGTTTCTTCGTCC
TGAAAATAAATGAATCGAAAAAACTATTCTCTGCTTTAATTTTAATCATTTTTTTGTTATCTGCTTCCTTAGCATATTTA
AGTGCGGGTGGATCCGCAAAGGGGGATTTGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGTTAAACTA
TCTTCTCTTCTTATATCAATATTTTAAAGAGCTAGGTACTGTGTTATTTAACAAAAAAGTTTTTATATTATATTCAATTC
CATTTTTAAATCTAGTTTTTGAATTGTTTCGTACTCAACTTTTCTTTAGGCATTATGTGCCTAAAATAAATTTACTATCG
TTCTTTATTTCATTTATAATCGTGAGCGTTTATTTTGGATCTATCTTAATTAAAAGTAAGGATACTGAACAAGCGCATAT
TATAAAAGTTCTTACCATAATTAATATTTTATCTTTTTCGCCGTTCTTGTTTTTATATATAATACCTTATGTATTCTTAG
GCACAGATGGCATTTCTTCTTTTCTGGCTGCTTCATTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTAAGCAGGTTAAAATATTATGGAATATTAGCATTAACGCCTACAATTATTTT
AGTTACTGTATTTGAGTTAATGGGAAGTCCAGCTGGAGATTATTATTATTTCAGACTTGCGATTCTGATGTATATTATTA
TGGTGGCAGTGTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAGAGAGTTTCGGAAAAATTTAATTATCAA
GACAGTATATATAAATTTACGCAGCTCATTAGAGACTCAATATCTTTGAATCAAGTATTTGAAGAACTGAAAAATACTAT
ACTTGAGGTCTCCCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAAGTATTAAACTGTACAATGGTGAGC
CCGTAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTCACACCCGAAATAGGAAAAATCGTTGAATTTAAT
AAAGGCTTTGTCATGAAGATAGGTGAACGCGGCGGAAAATCATTTGTGATTCTTTGTTTATCTAAAATGAATACGCCCCG
TCTTACACTTGAAGAACTTTCTTGGCTGAAAACCTTGGCGTTTTATACAAACGTATCGATTGAAAACGTCATGAAAATCG
AAGAGCTGATGAGTCATTTAGAAGAAATAAAACAACAGGAATCAAACCCCGTTTGGCTCAAAAAACTCATGTACACGATC
GAAGAAAAACAACGTTCCGATCTCGCCCGCGATCTCCACGATTCAGTTCTTCAGGATTTGATTTCATTAAAGCGGCAGTG
TGAGCTGTTTTTGGCTGATTTTAAGAAGGATGATGATCCATGCCGTGAAGAGGTGCAGGACAAGCTCGTGCAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTTTGTATGATTTGGGACTG
GTGAAGGCGTTGTCCAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGCTTAAATACCGGCAGATTTAC
GGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCGAATGCAGTGAAACACTCTC
AGGCGACGGAAGTGCTTATTATGCTGATCAGCATTCAAAACAAAATTGTTCTTCATTATGAGGACGATGGTGTGGGATTT
GATCAAGAGAAAACCAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTTAGATGGACG
CCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.455

100

0.584


Multiple sequence alignment