Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | NST56_RS13715 | Genome accession | NZ_CP150195 |
| Coordinates | 2586440..2587477 (-) | Length | 345 a.a. |
| NCBI ID | WP_326191101.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R5-0560 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2581440..2592477
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST56_RS13665 (NST56_13665) | tasA | 2581533..2582318 (-) | 786 | WP_168748227.1 | biofilm matrix protein TasA | - |
| NST56_RS13670 (NST56_13670) | - | 2582383..2582967 (-) | 585 | WP_339177148.1 | signal peptidase I | - |
| NST56_RS13675 (NST56_13675) | tapA | 2582939..2583700 (-) | 762 | WP_339177150.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NST56_RS13680 (NST56_13680) | - | 2583977..2584300 (+) | 324 | WP_168748230.1 | YqzG/YhdC family protein | - |
| NST56_RS13685 (NST56_13685) | - | 2584343..2584522 (-) | 180 | WP_003236949.1 | YqzE family protein | - |
| NST56_RS13690 (NST56_13690) | comGG | 2584594..2584968 (-) | 375 | WP_339177153.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| NST56_RS13695 (NST56_13695) | comGF | 2584969..2585352 (-) | 384 | WP_339177156.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NST56_RS13700 (NST56_13700) | comGE | 2585378..2585725 (-) | 348 | WP_168748233.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| NST56_RS13705 (NST56_13705) | comGD | 2585709..2586140 (-) | 432 | WP_168748234.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| NST56_RS13710 (NST56_13710) | comGC | 2586130..2586426 (-) | 297 | WP_168748235.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NST56_RS13715 (NST56_13715) | comGB | 2586440..2587477 (-) | 1038 | WP_326191101.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NST56_RS13720 (NST56_13720) | comGA | 2587464..2588534 (-) | 1071 | WP_168748237.1 | competence protein ComGA | Machinery gene |
| NST56_RS13725 (NST56_13725) | - | 2588887..2589057 (-) | 171 | WP_339177165.1 | hypothetical protein | - |
| NST56_RS13730 (NST56_13730) | - | 2589281..2590231 (-) | 951 | WP_010334929.1 | magnesium transporter CorA family protein | - |
| NST56_RS13735 (NST56_13735) | - | 2590375..2591704 (+) | 1330 | Protein_2659 | hemolysin family protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39906.03 Da Isoelectric Point: 9.6878
>NTDB_id=965855 NST56_RS13715 WP_326191101.1 2586440..2587477(-) (comGB) [Bacillus sp. FSL R5-0560]
MKQIRKVWPLKDQAYLLKRLGEMTAGGYSLLDGLRLMQLQMNKRQLADLAAAIRRLREGESFYSVLKSLSFHKEAIGICY
FAETHGELPASMIQSGELLERKTAQAEHIKRVLRYPLFLIFTVGVMLYMLQNIIIPQFSGIYQSMNVETSRTTGIIFAFF
QHLDAVFILMAILAAGIGLYYWFVFKKKSPDRQMHICVSIPLFGKLVRLFNSYFFSLQLSSLLASGLSIYDSLKAFRHQT
FLPFYRHEAEQMIEQLKAGETIETALDKHPFYESDFSKVISHGQLSGRLDRELFTYSQFILQRLEDKSQKWTGILQPIIY
GFVAAMILIVYLSMLLPMYQMMNQM
MKQIRKVWPLKDQAYLLKRLGEMTAGGYSLLDGLRLMQLQMNKRQLADLAAAIRRLREGESFYSVLKSLSFHKEAIGICY
FAETHGELPASMIQSGELLERKTAQAEHIKRVLRYPLFLIFTVGVMLYMLQNIIIPQFSGIYQSMNVETSRTTGIIFAFF
QHLDAVFILMAILAAGIGLYYWFVFKKKSPDRQMHICVSIPLFGKLVRLFNSYFFSLQLSSLLASGLSIYDSLKAFRHQT
FLPFYRHEAEQMIEQLKAGETIETALDKHPFYESDFSKVISHGQLSGRLDRELFTYSQFILQRLEDKSQKWTGILQPIIY
GFVAAMILIVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=965855 NST56_RS13715 WP_326191101.1 2586440..2587477(-) (comGB) [Bacillus sp. FSL R5-0560]
ATGAAACAGATTAGAAAAGTTTGGCCGTTAAAGGATCAAGCCTATTTACTGAAAAGGCTGGGGGAAATGACAGCGGGCGG
ATACAGTCTTTTAGACGGGTTGCGCCTAATGCAGCTGCAAATGAATAAAAGGCAGCTGGCGGACTTGGCTGCCGCAATAA
GACGATTGAGAGAAGGGGAATCATTTTACTCTGTATTAAAGAGCTTGTCATTTCATAAAGAAGCCATTGGTATTTGTTAT
TTTGCTGAAACACATGGAGAATTGCCGGCTTCCATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAACAGCGCAGGCAGA
GCATATTAAAAGGGTGCTGAGATATCCTCTTTTTCTCATCTTTACCGTTGGTGTCATGCTCTATATGCTGCAAAACATCA
TCATCCCTCAGTTTTCCGGTATTTATCAATCGATGAATGTAGAAACTTCACGCACAACAGGCATCATTTTTGCGTTTTTT
CAGCACCTTGATGCCGTCTTCATATTAATGGCCATTTTGGCCGCAGGGATAGGTCTTTATTATTGGTTTGTGTTTAAGAA
AAAATCCCCTGACCGCCAAATGCACATTTGCGTAAGTATTCCTCTGTTTGGAAAGCTGGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTACAGCTGAGCAGTCTTCTGGCATCAGGACTTTCTATTTATGACAGTTTGAAAGCATTTAGACATCAAACG
TTTCTTCCTTTCTACCGCCACGAAGCTGAACAAATGATTGAACAGTTAAAAGCCGGTGAAACCATTGAAACTGCTTTAGA
CAAACACCCTTTTTACGAAAGTGATTTTTCAAAAGTAATATCTCATGGCCAGCTAAGCGGCCGTTTGGACCGGGAACTCT
TCACGTACAGTCAGTTTATATTGCAGCGGCTTGAGGACAAGTCACAAAAATGGACAGGCATTCTTCAGCCCATTATTTAT
GGATTTGTGGCAGCGATGATTTTAATTGTGTATTTATCGATGCTCCTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAACAGATTAGAAAAGTTTGGCCGTTAAAGGATCAAGCCTATTTACTGAAAAGGCTGGGGGAAATGACAGCGGGCGG
ATACAGTCTTTTAGACGGGTTGCGCCTAATGCAGCTGCAAATGAATAAAAGGCAGCTGGCGGACTTGGCTGCCGCAATAA
GACGATTGAGAGAAGGGGAATCATTTTACTCTGTATTAAAGAGCTTGTCATTTCATAAAGAAGCCATTGGTATTTGTTAT
TTTGCTGAAACACATGGAGAATTGCCGGCTTCCATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAACAGCGCAGGCAGA
GCATATTAAAAGGGTGCTGAGATATCCTCTTTTTCTCATCTTTACCGTTGGTGTCATGCTCTATATGCTGCAAAACATCA
TCATCCCTCAGTTTTCCGGTATTTATCAATCGATGAATGTAGAAACTTCACGCACAACAGGCATCATTTTTGCGTTTTTT
CAGCACCTTGATGCCGTCTTCATATTAATGGCCATTTTGGCCGCAGGGATAGGTCTTTATTATTGGTTTGTGTTTAAGAA
AAAATCCCCTGACCGCCAAATGCACATTTGCGTAAGTATTCCTCTGTTTGGAAAGCTGGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTACAGCTGAGCAGTCTTCTGGCATCAGGACTTTCTATTTATGACAGTTTGAAAGCATTTAGACATCAAACG
TTTCTTCCTTTCTACCGCCACGAAGCTGAACAAATGATTGAACAGTTAAAAGCCGGTGAAACCATTGAAACTGCTTTAGA
CAAACACCCTTTTTACGAAAGTGATTTTTCAAAAGTAATATCTCATGGCCAGCTAAGCGGCCGTTTGGACCGGGAACTCT
TCACGTACAGTCAGTTTATATTGCAGCGGCTTGAGGACAAGTCACAAAAATGGACAGGCATTCTTCAGCCCATTATTTAT
GGATTTGTGGCAGCGATGATTTTAATTGTGTATTTATCGATGCTCCTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
81.115 |
93.623 |
0.759 |