Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSQ84_RS12180 | Genome accession | NZ_CP150188 |
| Coordinates | 2533853..2534920 (-) | Length | 355 a.a. |
| NCBI ID | WP_066247583.1 | Uniprot ID | - |
| Organism | Aeribacillus sp. FSL K6-3256 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2528853..2539920
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ84_RS12140 (NSQ84_12140) | - | 2529797..2530594 (+) | 798 | WP_327874155.1 | YqhG family protein | - |
| NSQ84_RS12145 (NSQ84_12145) | - | 2530685..2530864 (-) | 180 | WP_130156369.1 | YqzE family protein | - |
| NSQ84_RS12150 (NSQ84_12150) | comGG | 2530984..2531355 (-) | 372 | WP_327874156.1 | competence type IV pilus minor pilin ComGG | - |
| NSQ84_RS12155 (NSQ84_12155) | comGF | 2531352..2531843 (-) | 492 | WP_133309105.1 | competence type IV pilus minor pilin ComGF | - |
| NSQ84_RS12160 (NSQ84_12160) | - | 2531773..2532099 (-) | 327 | WP_063388097.1 | hypothetical protein | - |
| NSQ84_RS12165 (NSQ84_12165) | comGD | 2532083..2532544 (-) | 462 | WP_066247587.1 | competence type IV pilus minor pilin ComGD | - |
| NSQ84_RS12170 (NSQ84_12170) | comGC | 2532513..2532824 (-) | 312 | WP_063388095.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSQ84_RS12175 (NSQ84_12175) | comGB | 2532829..2533860 (-) | 1032 | WP_339211940.1 | competence type IV pilus assembly protein ComGB | - |
| NSQ84_RS12180 (NSQ84_12180) | comGA | 2533853..2534920 (-) | 1068 | WP_066247583.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSQ84_RS12185 (NSQ84_12185) | - | 2535237..2535482 (+) | 246 | WP_063388092.1 | DUF2626 domain-containing protein | - |
| NSQ84_RS12190 (NSQ84_12190) | - | 2535537..2536181 (-) | 645 | WP_327874108.1 | MBL fold metallo-hydrolase | - |
| NSQ84_RS12195 (NSQ84_12195) | - | 2536427..2536600 (+) | 174 | WP_065095533.1 | DUF2759 domain-containing protein | - |
| NSQ84_RS12200 (NSQ84_12200) | - | 2536717..2537835 (-) | 1119 | WP_327873821.1 | hypothetical protein | - |
| NSQ84_RS12205 (NSQ84_12205) | - | 2537906..2539027 (-) | 1122 | WP_094246210.1 | M14 family metallocarboxypeptidase | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 40503.35 Da Isoelectric Point: 8.6397
>NTDB_id=965534 NSQ84_RS12180 WP_066247583.1 2533853..2534920(-) (comGA) [Aeribacillus sp. FSL K6-3256]
MIEIEKLSEKLIELACSFSASDIHIVPKKKKAVIQFRIDDDIKEIFHLPKAICERLISHFKFMAQMDIGEKRRPQNGAYS
FHTIYGEVHLRLSTLPTVFDESLVIRILLEQSIQSPEKLSLFPSESKKMLSFLKHSHGLLILTGPTGSGKTTTLYSLLHY
AKKHFKRNIITLEDPVETKSDEMLQVQINEKAGITYANGLKAILRHDPDVIMVGEIRDHETARIAVRAGLSGHLVLTTMH
TRDAKGAIYRLLEFGVTFSEIEQTLIAVAAQRLVHLICPFCKGNCPPYCKKLKEIRRIGVYELLYGKNLTAAIREAKGEE
QSELDYMKLKDVIKKGIALGYLYPDIYDRWVFEYE
MIEIEKLSEKLIELACSFSASDIHIVPKKKKAVIQFRIDDDIKEIFHLPKAICERLISHFKFMAQMDIGEKRRPQNGAYS
FHTIYGEVHLRLSTLPTVFDESLVIRILLEQSIQSPEKLSLFPSESKKMLSFLKHSHGLLILTGPTGSGKTTTLYSLLHY
AKKHFKRNIITLEDPVETKSDEMLQVQINEKAGITYANGLKAILRHDPDVIMVGEIRDHETARIAVRAGLSGHLVLTTMH
TRDAKGAIYRLLEFGVTFSEIEQTLIAVAAQRLVHLICPFCKGNCPPYCKKLKEIRRIGVYELLYGKNLTAAIREAKGEE
QSELDYMKLKDVIKKGIALGYLYPDIYDRWVFEYE
Nucleotide
Download Length: 1068 bp
>NTDB_id=965534 NSQ84_RS12180 WP_066247583.1 2533853..2534920(-) (comGA) [Aeribacillus sp. FSL K6-3256]
ATGATTGAAATTGAAAAGCTTAGCGAAAAACTGATTGAACTGGCGTGTTCATTTAGTGCCTCAGACATCCATATTGTTCC
GAAAAAGAAAAAAGCAGTTATTCAATTTCGAATTGACGATGACATCAAAGAAATATTTCATCTGCCAAAAGCTATTTGTG
AACGCTTAATTTCTCATTTTAAATTTATGGCCCAAATGGATATTGGCGAAAAAAGGCGTCCGCAAAACGGTGCTTACTCC
TTCCATACGATTTACGGAGAGGTGCATCTTCGTTTATCGACATTGCCTACAGTATTCGATGAAAGTCTAGTCATCCGAAT
ATTGCTAGAGCAATCGATTCAATCGCCTGAAAAACTTTCATTGTTCCCGTCAGAATCCAAAAAAATGCTTTCATTTTTAA
AGCATTCTCACGGTCTCCTGATCCTTACCGGTCCGACCGGTTCGGGAAAAACGACCACTCTTTATTCGCTTCTCCATTAT
GCAAAAAAACATTTTAAAAGAAACATCATCACACTTGAAGATCCTGTGGAAACGAAAAGCGATGAAATGCTTCAAGTGCA
GATCAATGAAAAAGCTGGAATTACGTATGCAAATGGGTTAAAAGCAATATTAAGACATGATCCTGATGTCATTATGGTCG
GTGAAATTCGGGATCATGAGACAGCAAGGATTGCGGTCCGGGCTGGGCTTAGCGGACATTTAGTACTGACCACCATGCAT
ACGCGGGATGCAAAGGGGGCTATTTATCGATTATTAGAATTTGGTGTAACCTTTTCCGAAATTGAGCAAACTTTGATCGC
TGTTGCTGCGCAGCGTCTCGTTCATTTAATATGCCCGTTTTGCAAAGGGAATTGCCCGCCTTATTGCAAAAAATTAAAGG
AAATTAGGAGAATTGGGGTCTATGAACTTCTTTACGGCAAAAATTTAACCGCCGCTATTCGGGAAGCAAAAGGAGAGGAG
CAGAGTGAGTTAGATTATATGAAGTTAAAAGATGTAATTAAAAAAGGAATCGCTCTTGGGTATTTATATCCGGACATATA
TGATCGTTGGGTGTTTGAATATGAATAA
ATGATTGAAATTGAAAAGCTTAGCGAAAAACTGATTGAACTGGCGTGTTCATTTAGTGCCTCAGACATCCATATTGTTCC
GAAAAAGAAAAAAGCAGTTATTCAATTTCGAATTGACGATGACATCAAAGAAATATTTCATCTGCCAAAAGCTATTTGTG
AACGCTTAATTTCTCATTTTAAATTTATGGCCCAAATGGATATTGGCGAAAAAAGGCGTCCGCAAAACGGTGCTTACTCC
TTCCATACGATTTACGGAGAGGTGCATCTTCGTTTATCGACATTGCCTACAGTATTCGATGAAAGTCTAGTCATCCGAAT
ATTGCTAGAGCAATCGATTCAATCGCCTGAAAAACTTTCATTGTTCCCGTCAGAATCCAAAAAAATGCTTTCATTTTTAA
AGCATTCTCACGGTCTCCTGATCCTTACCGGTCCGACCGGTTCGGGAAAAACGACCACTCTTTATTCGCTTCTCCATTAT
GCAAAAAAACATTTTAAAAGAAACATCATCACACTTGAAGATCCTGTGGAAACGAAAAGCGATGAAATGCTTCAAGTGCA
GATCAATGAAAAAGCTGGAATTACGTATGCAAATGGGTTAAAAGCAATATTAAGACATGATCCTGATGTCATTATGGTCG
GTGAAATTCGGGATCATGAGACAGCAAGGATTGCGGTCCGGGCTGGGCTTAGCGGACATTTAGTACTGACCACCATGCAT
ACGCGGGATGCAAAGGGGGCTATTTATCGATTATTAGAATTTGGTGTAACCTTTTCCGAAATTGAGCAAACTTTGATCGC
TGTTGCTGCGCAGCGTCTCGTTCATTTAATATGCCCGTTTTGCAAAGGGAATTGCCCGCCTTATTGCAAAAAATTAAAGG
AAATTAGGAGAATTGGGGTCTATGAACTTCTTTACGGCAAAAATTTAACCGCCGCTATTCGGGAAGCAAAAGGAGAGGAG
CAGAGTGAGTTAGATTATATGAAGTTAAAAGATGTAATTAAAAAAGGAATCGCTCTTGGGTATTTATATCCGGACATATA
TGATCGTTGGGTGTTTGAATATGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
62.606 |
99.437 |
0.623 |
| pilB | Glaesserella parasuis strain SC1401 |
39.706 |
95.775 |
0.38 |
| pilF | Thermus thermophilus HB27 |
42.809 |
84.225 |
0.361 |