Detailed information NTG0096532

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: AAA995_RS09440
• Genome accession: NZ_AP028877
• Coordinates: 1838106..1839005 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904833.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 21P20
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1833106..1844005

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA995_RS09415 (SP21P20_18550)	rsmA	1833436..1834308 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
AAA995_RS09420 (SP21P20_18560)	-	1834439..1834747 (-)	309	WP_000333257.1	hypothetical protein	-
AAA995_RS09425 (SP21P20_18570)	-	1834740..1835381 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
AAA995_RS09430 (SP21P20_18580)	-	1835383..1837413 (-)	2031	WP_000825257.1	bacteriocin-associated integral membrane family protein	-
AAA995_RS09435 (SP21P20_18590)	-	1837490..1837786 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
AAA995_RS09440 (SP21P20_18600)	comR	1838106..1839005 (-)	900	WP_000904833.1	helix-turn-helix transcriptional regulator	Regulator
AAA995_RS09445 (SP21P20_18610)	rnmV	1839077..1839637 (-)	561	WP_000664448.1	ribonuclease M5	-
AAA995_RS09450 (SP21P20_18620)	-	1839637..1840410 (-)	774	WP_000575638.1	TatD family hydrolase	-
AAA995_RS09455	-	1840715..1841608 (-)	894	Protein_1850	DUF1542 domain-containing protein	-
AAA995_RS09460 (SP21P20_18650)	rpmH	1841892..1842026 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
AAA995_RS09465 (SP21P20_18660)	-	1842171..1843385 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
AAA995_RS09470	-	1843541..1843835 (-)	295	Protein_1853	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35335.16 Da
• Isoelectric Point: 4.8989

>NTDB_id=96532 AAA995_RS09440 WP_000904833.1 1838106..1839005(-) (comR) [Streptococcus pneumoniae strain 21P20]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=96532 AAA995_RS09440 WP_000904833.1 1838106..1839005(-) (comR) [Streptococcus pneumoniae strain 21P20]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361