Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSU05_RS12385 | Genome accession | NZ_CP150177 |
| Coordinates | 2429147..2430217 (-) | Length | 356 a.a. |
| NCBI ID | WP_015714258.1 | Uniprot ID | - |
| Organism | Bacillus sp. EU52 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2424147..2435217
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSU05_RS12340 (NSU05_12340) | tapA | 2424626..2425387 (-) | 762 | WP_015714251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSU05_RS12345 (NSU05_12345) | - | 2425659..2425985 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NSU05_RS12350 (NSU05_12350) | - | 2426027..2426206 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| NSU05_RS12355 (NSU05_12355) | comGG | 2426277..2426651 (-) | 375 | WP_015714252.1 | ComG operon protein ComGG | Machinery gene |
| NSU05_RS12360 (NSU05_12360) | comGF | 2426652..2427035 (-) | 384 | WP_038429292.1 | ComG operon protein ComGF | Machinery gene |
| NSU05_RS12365 (NSU05_12365) | comGE | 2427061..2427408 (-) | 348 | WP_015714254.1 | ComG operon protein 5 | Machinery gene |
| NSU05_RS12370 (NSU05_12370) | comGD | 2427392..2427823 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| NSU05_RS12375 (NSU05_12375) | comGC | 2427813..2428109 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NSU05_RS12380 (NSU05_12380) | comGB | 2428123..2429160 (-) | 1038 | WP_015714257.1 | comG operon protein ComGB | Machinery gene |
| NSU05_RS12385 (NSU05_12385) | comGA | 2429147..2430217 (-) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| NSU05_RS12390 (NSU05_12390) | corA | 2430629..2431582 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| NSU05_RS12395 (NSU05_12395) | - | 2431725..2433050 (+) | 1326 | WP_038429293.1 | hemolysin family protein | - |
| NSU05_RS12400 (NSU05_12400) | rsbRD | 2433107..2433943 (-) | 837 | WP_038429294.1 | RsbT co-antagonist protein RsbRD | - |
| NSU05_RS12410 (NSU05_12410) | mgsR | 2434167..2434547 (-) | 381 | WP_014477337.1 | transcriptional regulator MgsR | - |
| NSU05_RS12415 (NSU05_12415) | - | 2434777..2435022 (+) | 246 | WP_038429295.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40488.67 Da Isoelectric Point: 9.0175
>NTDB_id=965092 NSU05_RS12385 WP_015714258.1 2429147..2430217(-) (comGA) [Bacillus sp. EU52]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSTGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSTGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=965092 NSU05_RS12385 WP_015714258.1 2429147..2430217(-) (comGA) [Bacillus sp. EU52]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCACAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTGACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCCATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCACTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCACAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTGACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCCATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCACTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
99.719 |
100 |
0.997 |