Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | NSU05_RS12380 | Genome accession | NZ_CP150177 |
| Coordinates | 2428123..2429160 (-) | Length | 345 a.a. |
| NCBI ID | WP_015714257.1 | Uniprot ID | - |
| Organism | Bacillus sp. EU52 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2423123..2434160
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSU05_RS12330 (NSU05_12330) | tasA | 2423221..2424006 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| NSU05_RS12335 (NSU05_12335) | - | 2424070..2424642 (-) | 573 | WP_003230181.1 | signal peptidase I | - |
| NSU05_RS12340 (NSU05_12340) | tapA | 2424626..2425387 (-) | 762 | WP_015714251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSU05_RS12345 (NSU05_12345) | - | 2425659..2425985 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NSU05_RS12350 (NSU05_12350) | - | 2426027..2426206 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| NSU05_RS12355 (NSU05_12355) | comGG | 2426277..2426651 (-) | 375 | WP_015714252.1 | ComG operon protein ComGG | Machinery gene |
| NSU05_RS12360 (NSU05_12360) | comGF | 2426652..2427035 (-) | 384 | WP_038429292.1 | ComG operon protein ComGF | Machinery gene |
| NSU05_RS12365 (NSU05_12365) | comGE | 2427061..2427408 (-) | 348 | WP_015714254.1 | ComG operon protein 5 | Machinery gene |
| NSU05_RS12370 (NSU05_12370) | comGD | 2427392..2427823 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| NSU05_RS12375 (NSU05_12375) | comGC | 2427813..2428109 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NSU05_RS12380 (NSU05_12380) | comGB | 2428123..2429160 (-) | 1038 | WP_015714257.1 | comG operon protein ComGB | Machinery gene |
| NSU05_RS12385 (NSU05_12385) | comGA | 2429147..2430217 (-) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| NSU05_RS12390 (NSU05_12390) | corA | 2430629..2431582 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| NSU05_RS12395 (NSU05_12395) | - | 2431725..2433050 (+) | 1326 | WP_038429293.1 | hemolysin family protein | - |
| NSU05_RS12400 (NSU05_12400) | rsbRD | 2433107..2433943 (-) | 837 | WP_038429294.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39733.22 Da Isoelectric Point: 9.7900
>NTDB_id=965091 NSU05_RS12380 WP_015714257.1 2428123..2429160(-) (comGB) [Bacillus sp. EU52]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=965091 NSU05_RS12380 WP_015714257.1 2428123..2429160(-) (comGB) [Bacillus sp. EU52]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACTGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACTGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |