Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC   Type   Machinery gene
Locus tag   NSS75_RS19035 Genome accession   NZ_CP150175
Coordinates   3666830..3667552 (-) Length   240 a.a.
NCBI ID   WP_024123027.1    Uniprot ID   A0A9Q4EKM1
Organism   Bacillus sp. FSL K6-1012     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3661830..3672552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS75_RS19000 (NSS75_19000) fliW 3661971..3662402 (-) 432 WP_268497405.1 flagellar assembly protein FliW -
  NSS75_RS19005 (NSS75_19005) - 3662423..3662998 (-) 576 WP_268542869.1 DUF6470 family protein -
  NSS75_RS19010 (NSS75_19010) flgL 3663045..3663941 (-) 897 WP_095712912.1 flagellar hook-associated protein FlgL -
  NSS75_RS19015 (NSS75_19015) flgK 3663951..3665474 (-) 1524 WP_339234449.1 flagellar hook-associated protein FlgK -
  NSS75_RS19020 (NSS75_19020) flgN 3665493..3665975 (-) 483 WP_103671257.1 flagellar protein FlgN -
  NSS75_RS19025 (NSS75_19025) flgM 3665991..3666257 (-) 267 WP_003219712.1 flagellar biosynthesis anti-sigma factor FlgM -
  NSS75_RS19030 (NSS75_19030) - 3666337..3666756 (-) 420 WP_024123026.1 TIGR03826 family flagellar region protein -
  NSS75_RS19035 (NSS75_19035) comFC 3666830..3667552 (-) 723 WP_024123027.1 amidophosphoribosyltransferase Machinery gene
  NSS75_RS19040 (NSS75_19040) - 3667516..3667812 (-) 297 WP_103671256.1 late competence development ComFB family protein -
  NSS75_RS19045 (NSS75_19045) comFA 3667869..3669263 (-) 1395 WP_268497413.1 ATP-dependent helicase ComFA Machinery gene
  NSS75_RS19050 (NSS75_19050) - 3669370..3670215 (-) 846 WP_268497415.1 DegV family protein -
  NSS75_RS19055 (NSS75_19055) degU 3670312..3671001 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  NSS75_RS19060 (NSS75_19060) degS 3671084..3672241 (-) 1158 WP_024123030.1 two-component sensor histidine kinase DegS Regulator

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 27023.24 Da        Isoelectric Point: 8.6986

>NTDB_id=964950 NSS75_RS19035 WP_024123027.1 3666830..3667552(-) (comFC) [Bacillus sp. FSL K6-1012]
MRNETGGGSKKLICLLCDSQFSQAVSWCSLFLLKPDDRVCQSCRNKLQIIKGAICPLCGRPQTAHEVCADCEAWKSRIDD
GLRLSQNRSVYLYNDMMKETLARMKFRGDAAIISAFKNDFSSEFSAVYPDKRLVLVPIPLSEERKAERGFNQSQMLAECL
NRPILNPLIRLNNEKQSKKKKTERLLSEHVFETKNSSVEGMDIVLIDDLYTTGATLHYAARCLLEKGKAGSVSSFTLVRS

Nucleotide


Download         Length: 723 bp        

>NTDB_id=964950 NSS75_RS19035 WP_024123027.1 3666830..3667552(-) (comFC) [Bacillus sp. FSL K6-1012]
ATGCGAAACGAGACAGGAGGAGGCTCTAAAAAACTGATCTGTCTATTATGTGATTCACAATTTTCTCAAGCTGTTTCATG
GTGCTCACTATTCTTATTAAAACCTGACGACAGGGTCTGTCAGTCCTGCAGAAACAAATTACAGATCATCAAAGGGGCCA
TCTGTCCGCTTTGCGGCAGGCCTCAAACCGCTCATGAAGTGTGTGCGGATTGCGAGGCATGGAAATCAAGAATAGATGAC
GGCTTAAGGCTCAGTCAAAACCGTTCTGTTTACTTATATAATGACATGATGAAAGAAACGCTCGCCCGAATGAAATTCAG
GGGAGATGCAGCAATAATAAGCGCTTTTAAAAATGACTTTTCCTCAGAATTCTCTGCTGTCTATCCAGATAAACGCCTTG
TGCTCGTTCCCATTCCGTTAAGCGAAGAACGGAAAGCAGAACGCGGCTTTAACCAGTCACAAATGCTTGCTGAATGCTTA
AACCGGCCCATCCTCAATCCTCTCATCCGCCTGAATAATGAAAAGCAGTCTAAGAAAAAGAAAACGGAGCGCCTGCTTTC
AGAGCATGTTTTTGAAACAAAAAACAGCTCGGTTGAGGGTATGGATATCGTTTTAATCGACGATCTTTATACTACGGGCG
CCACTTTGCACTATGCTGCCCGCTGTTTATTGGAGAAAGGCAAAGCTGGTTCAGTGTCATCTTTTACCTTAGTGAGAAGC
TAA

Domains

Predicted by InterproScan.

Double zinc ribbon domain (DZR_2)

(14-71)

Phosphoribosyl transferase domain (Pribosyltran)

(184-238)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC Bacillus subtilis subsp. subtilis str. 168

76.25

100

0.763

Multiple sequence alignment