Detailed information NTG0964947

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACICHK_RS39270
• Genome accession: NZ_CP174283
• Coordinates: 8936775..8937944 (+)
• Length: 389 a.a.
• NCBI ID: WP_406840732.1
• Uniprot ID: -
• Organism: Streptomyces sp. AHU1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 8931775..8942944

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACICHK_RS39245 (ACICHK_39245)	-	8932064..8933461 (+)	1398	WP_406840727.1	FtsW/RodA/SpoVE family cell cycle protein	-
ACICHK_RS39250 (ACICHK_39250)	-	8933721..8934695 (+)	975	WP_406840728.1	ATP-binding protein	-
ACICHK_RS39255 (ACICHK_39255)	-	8934692..8935207 (+)	516	WP_406840729.1	hypothetical protein	-
ACICHK_RS39260 (ACICHK_39260)	-	8935204..8935995 (+)	792	WP_406840730.1	hypothetical protein	-
ACICHK_RS39265 (ACICHK_39265)	-	8936210..8936713 (+)	504	WP_406840731.1	single-stranded DNA-binding protein	-
ACICHK_RS39270 (ACICHK_39270)	recA	8936775..8937944 (+)	1170	WP_406840732.1	recombinase RecA	Machinery gene
ACICHK_RS39275 (ACICHK_39275)	ruvB	8938007..8939203 (+)	1197	WP_406840733.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ACICHK_RS39280 (ACICHK_39280)	-	8940191..8940760 (+)	570	WP_406840734.1	FAD/NAD(P)-binding protein	-
ACICHK_RS39285 (ACICHK_39285)	-	8941723..8942061 (+)	339	WP_406840735.1	MerR family transcriptional regulator	-
ACICHK_RS39290 (ACICHK_39290)	-	8942275..8942634 (-)	360	WP_406840736.1	hypothetical protein	-

Sequence

Protein

• Length: 389 a.a.
• Molecular weight: 41319.85 Da
• Isoelectric Point: 5.7253

>NTDB_id=964947 ACICHK_RS39270 WP_406840732.1 8936775..8937944(+) (recA) [Streptomyces sp. AHU1]
MKEQDREEALELALAQIEKRFGAGSVMRLSDEPEVPVEVIPTGSIALDLALGVGGLPRGRVVEIYGPESSGKTTLALHAM
ANAQKAGRTAAFIDAEYGLDLEYAKRLGVDTDTLLVCQPDNGEQALQIADTLIHSGALGLIVIDSVAALVPRAEIEGEMG
DPHVGLQARLMSQALRKISGALSHSGTTMIFINQLREKIGVVFGSPETTTGGRALKFYASVRLDIRRIETLKDGTEPVGN
HTRVKVAKNKVAPPFRQAEFDILYGRGISHEGELIDLGVQQGLVRKSGTWYTYEGDRLGQGKENARAFLGDHPDLTDEIE
KKTREKLGIGAKPEAPAAEPWADRANRAAAPGTVPFDSAAAGRRSTGPAASAPSGPAPRVLLDGTQAGP

Nucleotide

• Length: 1170 bp

>NTDB_id=964947 ACICHK_RS39270 WP_406840732.1 8936775..8937944(+) (recA) [Streptomyces sp. AHU1]
ATGAAGGAACAGGACCGCGAGGAAGCGCTCGAACTCGCCCTCGCCCAGATCGAAAAAAGGTTCGGCGCGGGCTCGGTGAT
GCGCCTGAGCGATGAGCCGGAGGTCCCCGTCGAGGTCATCCCCACCGGCTCGATCGCCCTGGATCTCGCCCTCGGTGTCG
GCGGCCTGCCGCGCGGCCGCGTGGTGGAGATCTACGGCCCGGAGTCCTCCGGCAAGACGACCCTGGCCCTGCACGCCATG
GCCAACGCGCAGAAGGCAGGCAGGACCGCGGCGTTCATCGACGCCGAGTACGGCCTCGACCTCGAGTACGCCAAGCGGCT
CGGCGTCGACACCGACACCCTGCTGGTCTGCCAGCCGGACAACGGCGAACAGGCCCTGCAGATCGCCGACACCCTCATCC
ACTCCGGCGCCCTGGGCCTCATCGTCATCGACTCCGTCGCCGCGCTGGTGCCGCGCGCGGAGATCGAGGGCGAGATGGGC
GACCCGCACGTCGGCCTGCAGGCCCGGCTGATGAGCCAGGCGCTCCGGAAGATCTCCGGCGCGCTGAGCCACTCCGGAAC
CACGATGATCTTCATCAACCAGCTGCGCGAGAAGATCGGAGTGGTCTTCGGCTCGCCGGAGACCACGACCGGTGGCCGCG
CCCTGAAGTTCTACGCCTCGGTCCGCCTGGACATCCGCCGGATCGAGACCCTCAAGGACGGCACCGAGCCGGTGGGCAAC
CACACCCGCGTCAAGGTGGCCAAGAACAAGGTCGCCCCGCCGTTCAGGCAGGCCGAGTTCGACATCCTCTACGGCCGGGG
CATCAGCCACGAGGGCGAGCTGATCGACCTGGGCGTCCAGCAAGGCCTCGTCCGCAAGTCCGGCACCTGGTACACGTACG
AGGGCGACCGGCTCGGCCAGGGCAAGGAGAACGCCCGCGCCTTCCTCGGGGACCACCCCGACCTCACCGACGAGATCGAG
AAGAAGACCAGGGAGAAACTGGGAATCGGGGCGAAGCCGGAGGCCCCGGCGGCGGAGCCCTGGGCGGACAGGGCGAACCG
AGCGGCCGCACCCGGCACCGTGCCGTTCGACTCGGCCGCGGCCGGCCGACGCTCCACCGGGCCGGCCGCGTCGGCCCCGA
GCGGTCCGGCCCCCCGCGTCCTCCTCGACGGCACCCAGGCCGGGCCGTGA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (9-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	63.265	88.175	0.558
recA	Staphylococcus aureus strain ATCC 12600	64.22	84.062	0.54
recA	Acinetobacter baylyi ADP1	62.388	86.118	0.537
recA	Ralstonia pseudosolanacearum GMI1000	66.773	80.463	0.537
recA	Neisseria gonorrhoeae strain FA1090	63.19	83.805	0.53
recA	Neisseria gonorrhoeae MS11	63.19	83.805	0.53
recA	Acinetobacter nosocomialis M2	63.077	83.548	0.527
recA	Acinetobacter baumannii D1279779	62.769	83.548	0.524
recA	Bacillus subtilis subsp. subtilis str. 168	62.462	83.548	0.522
recA	Latilactobacillus sakei subsp. sakei 23K	60.778	85.861	0.522
recA	Vibrio cholerae strain A1552	61.846	83.548	0.517
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.846	83.548	0.517
recA	Helicobacter pylori strain NCTC11637	60.856	84.062	0.512
recA	Helicobacter pylori 26695	60.856	84.062	0.512
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.366	84.319	0.509
recA	Streptococcus pyogenes NZ131	59.574	84.576	0.504
recA	Lactococcus lactis subsp. cremoris KW2	59.574	84.576	0.504
recA	Glaesserella parasuis strain SC1401	59.877	83.29	0.499
recA	Streptococcus pneumoniae TIGR4	58.967	84.576	0.499
recA	Streptococcus pneumoniae R6	58.967	84.576	0.499
recA	Streptococcus pneumoniae R36A	58.967	84.576	0.499
recA	Streptococcus pneumoniae Rx1	58.967	84.576	0.499
recA	Streptococcus pneumoniae D39	58.967	84.576	0.499
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	58.663	84.576	0.496
recA	Streptococcus mutans UA159	58.359	84.576	0.494
recA	Streptococcus thermophilus LMD-9	58.182	84.833	0.494
recA	Streptococcus thermophilus LMG 18311	58.182	84.833	0.494
recA	Streptococcus mitis NCTC 12261	58.182	84.833	0.494
recA	Streptococcus mitis SK321	57.879	84.833	0.491
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.632	82.519	0.476