Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NSS75_RS17080 Genome accession   NZ_CP150175
Coordinates   3275089..3277389 (-) Length   766 a.a.
NCBI ID   WP_339234063.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1012     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3270089..3282389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS75_RS17040 (NSS75_17040) - 3270557..3270988 (+) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -
  NSS75_RS17045 (NSS75_17045) - 3270988..3271329 (+) 342 WP_095713974.1 Na(+)/H(+) antiporter subunit C -
  NSS75_RS17050 (NSS75_17050) - 3271322..3272803 (+) 1482 WP_103671366.1 Na+/H+ antiporter subunit D -
  NSS75_RS17055 (NSS75_17055) - 3272809..3273285 (+) 477 WP_044158941.1 Na+/H+ antiporter subunit E -
  NSS75_RS17060 (NSS75_17060) - 3273285..3273569 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  NSS75_RS17065 (NSS75_17065) mnhG 3273553..3273927 (+) 375 WP_024122678.1 monovalent cation/H(+) antiporter subunit G -
  NSS75_RS17070 (NSS75_17070) - 3273966..3274346 (-) 381 WP_024122679.1 hotdog fold thioesterase -
  NSS75_RS17075 (NSS75_17075) comA 3274364..3275008 (-) 645 WP_024122680.1 two-component system response regulator ComA Regulator
  NSS75_RS17080 (NSS75_17080) comP 3275089..3277389 (-) 2301 WP_339234063.1 histidine kinase Regulator
  NSS75_RS17085 (NSS75_17085) comX 3277401..3277565 (-) 165 WP_105991648.1 competence pheromone ComX -
  NSS75_RS17090 (NSS75_17090) - 3277578..3278438 (-) 861 WP_101860066.1 polyprenyl synthetase family protein -
  NSS75_RS17095 (NSS75_17095) degQ 3278623..3278763 (-) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  NSS75_RS17100 (NSS75_17100) - 3279224..3279592 (+) 369 WP_024122684.1 hypothetical protein -
  NSS75_RS17105 (NSS75_17105) - 3279568..3280797 (-) 1230 WP_044158949.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88334.50 Da        Isoelectric Point: 8.2283

>NTDB_id=964946 NSS75_RS17080 WP_339234063.1 3275089..3277389(-) (comP) [Bacillus sp. FSL K6-1012]
MKAWYNKVSILLILVSLVYVTYLTYISSSKLLVGAAVAKNHDNEVVVTNIEEFSTAYYSGLQKGDVIKSINNHKVKRPLE
VQKYNSNHVSSIVVERDGEKVRVKPDLMNDGNFTTFVIPLIFYIACLFCCFFVLKINESKKLFSALILIIFLLSASLAYL
SAGGSAKGDLLSRCIMVFTLTSVMLNYLLFLYQYFKELGTVLFNKKVFILYSIPVLNLVFELFRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLGTDGISSFLAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIVLVTVFELMGSPAGDYYYFRLAILMYLIMVAVFYYKEVLDFRFRLKRVSEKFNYQ
DSTYKFTQLIRDSTSLTQVFEELKNTILEVSLVSRAHVYEVSADGSIKLHEELNINSFEKVYQKEFKKVTSEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDDPCREEVQGKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDGVGF
DLEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=964946 NSS75_RS17080 WP_339234063.1 3275089..3277389(-) (comP) [Bacillus sp. FSL K6-1012]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTGTTGATTTTAGTAAGTTTAGTTTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCGGTAGCCAAAAACCATGACAATGAAGTTGTGGTAACAAACATTGAGGAATTCT
CTACGGCTTACTATTCTGGATTACAAAAAGGGGACGTTATTAAAAGTATTAATAATCATAAAGTTAAACGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCAATAGTCGTCGAGAGGGATGGAGAAAAGGTTAGGGTTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTAATCCCACTAATATTTTATATAGCTTGTCTATTTTGTTGTTTCTTTGTCC
TGAAAATAAATGAATCGAAAAAATTATTCTCTGCTTTAATTTTAATCATTTTTTTGTTATCTGCTTCTTTAGCATATTTA
AGTGCGGGTGGATCCGCAAAGGGGGATTTGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGCTTAACTA
TCTTCTCTTCTTATATCAGTATTTTAAAGAGCTAGGCACTGTGTTATTTAACAAAAAAGTTTTTATATTATATTCAATTC
CAGTATTAAATCTAGTTTTTGAATTGTTTCGTACTCAACTTTTCTTTAGGCATTATGTGCCTAAAATAAATTTACTATCG
TTCTTTATTTCATTTATAATCGTGAGCGTTTATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCGCATAT
TATAAAAGTTCTTACCATAATTAATATTTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAG
GTACAGATGGCATTTCTTCTTTTCTAGCTGCTTCTTTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGACTTTATTTTAAGCAGGTTAAAATATTATGGAATATTAGCATTAACACCCACAATTGTTTT
AGTTACTGTATTTGAGTTAATGGGAAGTCCAGCTGGAGATTATTATTATTTCAGACTTGCGATTCTGATGTATTTGATTA
TGGTGGCAGTGTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAGAGAGTTTCGGAAAAATTTAATTATCAA
GACAGCACATATAAATTTACACAGCTGATTAGAGACTCAACCTCCTTGACCCAAGTATTTGAAGAACTGAAAAACACAAT
ACTTGAGGTTTCACTTGTAAGCAGAGCTCATGTTTATGAGGTTTCAGCTGATGGAAGTATTAAACTCCATGAAGAACTTA
ATATAAATTCATTTGAAAAAGTCTATCAAAAAGAGTTCAAAAAAGTAACATCTGAAATTGGTAAAATTGTTGAATTTAAT
AAGGGATTTGTCATGAAAATAGGTGAACGCGGCGGAAAATCATTTGTGATTCTATGTTTATCTAAAATGAATACGCCCCG
CCTCACGCTTGAAGAACTTTCTTGGCTGAAAACCTTGGCTTTTTATACAAATGTCTCAATCGAAAACGTCATGAAAATTG
AAGAGCTGATGAGTCATTTAGAAGAAATAAAACAACAGGAATCAAACCCCGTCTGGCTCAAAAAACTCATGTACACCATT
GAAGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATCTGATTTCATTAAAACGCCAGTG
TGAGCTGTTTTTGGCTGATTTTAAGAAGGATGATGATCCATGTCGTGAAGAGGTGCAGGGCAAGCTCGTGCAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGAGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGATTTGGGACTG
GTGAAGGCGTTGTCCAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGCTTAAATACCGGCAGATTTAC
GGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCAAATGCAGTGAAACACTCTC
AGGCGACGGAAGTGCTTATCATGCTGATCAGTATTCAGAACAAAATTGTTCTTCATTATGAGGACGATGGTGTCGGATTT
GATCTGGAGAAAAATAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTTAGATGGACG
CCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.455

100

0.584


Multiple sequence alignment