Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   NYE79_RS08840 Genome accession   NZ_CP150168
Coordinates   1807796..1808419 (-) Length   207 a.a.
NCBI ID   WP_084881500.1    Uniprot ID   A0A1X1HXR5
Organism   Streptococcus sp. FSL W8-0197     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1802796..1813419
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE79_RS08810 (NYE79_08810) - 1802855..1803049 (-) 195 WP_000415528.1 PspC domain-containing protein -
  NYE79_RS08815 (NYE79_08815) recA 1803178..1804329 (-) 1152 WP_001085520.1 recombinase RecA Machinery gene
  NYE79_RS08820 (NYE79_08820) cinA 1804384..1805640 (-) 1257 WP_000642671.1 competence/damage-inducible protein A Machinery gene
  NYE79_RS08825 (NYE79_08825) - 1805713..1806753 (-) 1041 WP_125384748.1 LCP family protein -
  NYE79_RS08830 (NYE79_08830) - 1806758..1807279 (-) 522 WP_125384749.1 GNAT family N-acetyltransferase -
  NYE79_RS08835 (NYE79_08835) tsaE 1807269..1807712 (-) 444 WP_084881499.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  NYE79_RS08840 (NYE79_08840) comM 1807796..1808419 (-) 624 WP_084881500.1 hypothetical protein Regulator
  NYE79_RS08845 (NYE79_08845) ndk 1808554..1808973 (-) 420 WP_216728589.1 nucleoside-diphosphate kinase -
  NYE79_RS08850 (NYE79_08850) rpoC 1809084..1812749 (-) 3666 WP_216728590.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23670.63 Da        Isoelectric Point: 9.2521

>NTDB_id=964635 NYE79_RS08840 WP_084881500.1 1807796..1808419(-) (comM) [Streptococcus sp. FSL W8-0197]
MVKSIRLLLLIAVVQISFSSCLLWKESFLSLKQTNAYFLILIVGISVLCAGINYFHTADQSRHSILHVQKKVSLVYCLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRDIENHLNKKKTVVISVLATIVFLRNPIV
ISSILLYISVGFLCARFLFPKCIQREISFYGHLIRDIMFVFSIVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=964635 NYE79_RS08840 WP_084881500.1 1807796..1808419(-) (comM) [Streptococcus sp. FSL W8-0197]
ATGGTAAAATCAATTCGCCTATTGTTACTGATTGCAGTCGTCCAGATTAGTTTTAGTAGTTGTCTATTATGGAAAGAATC
CTTTTTATCTTTAAAACAGACCAATGCTTATTTTTTAATTTTAATAGTAGGAATTTCTGTTTTGTGCGCTGGGATAAATT
ATTTCCATACAGCAGACCAGTCTAGACATAGTATTTTACATGTTCAAAAGAAAGTGAGTCTTGTTTATTGCCTCCTTTTA
GTAGTCAATCTTCTGGCAACCTGTCTGGTTCTCTCAGAAAGCATCCAAACCACTAGCAAATTGCAGCAGGAATTGGTTGA
CCTCTTTTTACCCTCCTTCTTTTTCTTGCTAGGAGTAGATCTATTGATTTTCTTACCTTTTGATAAAATTTTTCGCGATA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCTACGATAGTTTTCTTGAGGAACCCCATAGTG
ATTTCCTCGATTCTTCTTTATATCAGTGTTGGTTTTCTATGCGCACGTTTCCTTTTTCCCAAATGTATCCAAAGGGAAAT
CTCCTTTTATGGACACCTGATTCGGGATATCATGTTTGTTTTTTCAATAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1HXR5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

50.971

99.517

0.507
  comM Streptococcus pneumoniae R6

50.971

99.517

0.507
  comM Streptococcus pneumoniae TIGR4

50.971

99.517

0.507
  comM Streptococcus mitis NCTC 12261

40.609

95.169

0.386
  comM Streptococcus mitis SK321

40.609

95.169

0.386

Multiple sequence alignment