Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSU02_RS13510 | Genome accession | NZ_CP150165 |
| Coordinates | 2779282..2780349 (-) | Length | 355 a.a. |
| NCBI ID | WP_130156359.1 | Uniprot ID | - |
| Organism | Aeribacillus sp. FSL W8-0870 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2774282..2785349
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSU02_RS13470 (NSU02_13470) | - | 2775226..2776023 (+) | 798 | WP_339195804.1 | YqhG family protein | - |
| NSU02_RS13475 (NSU02_13475) | - | 2776114..2776293 (-) | 180 | WP_130156369.1 | YqzE family protein | - |
| NSU02_RS13480 (NSU02_13480) | comGG | 2776413..2776784 (-) | 372 | WP_063388099.1 | competence type IV pilus minor pilin ComGG | - |
| NSU02_RS13485 (NSU02_13485) | comGF | 2776781..2777272 (-) | 492 | WP_130156367.1 | competence type IV pilus minor pilin ComGF | - |
| NSU02_RS13490 (NSU02_13490) | - | 2777202..2777528 (-) | 327 | WP_130156365.1 | hypothetical protein | - |
| NSU02_RS13495 (NSU02_13495) | comGD | 2777512..2777973 (-) | 462 | WP_158640149.1 | competence type IV pilus minor pilin ComGD | - |
| NSU02_RS13500 (NSU02_13500) | comGC | 2777942..2778253 (-) | 312 | WP_063388095.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSU02_RS13505 (NSU02_13505) | comGB | 2778258..2779289 (-) | 1032 | WP_339193046.1 | competence type IV pilus assembly protein ComGB | - |
| NSU02_RS13510 (NSU02_13510) | comGA | 2779282..2780349 (-) | 1068 | WP_130156359.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSU02_RS13515 (NSU02_13515) | - | 2780666..2780911 (+) | 246 | WP_063388092.1 | DUF2626 domain-containing protein | - |
| NSU02_RS13520 (NSU02_13520) | - | 2780966..2781610 (-) | 645 | WP_063388091.1 | MBL fold metallo-hydrolase | - |
| NSU02_RS13525 (NSU02_13525) | - | 2781857..2782030 (+) | 174 | WP_065095533.1 | DUF2759 domain-containing protein | - |
| NSU02_RS13530 (NSU02_13530) | - | 2782147..2783265 (-) | 1119 | WP_117016741.1 | hypothetical protein | - |
| NSU02_RS13535 (NSU02_13535) | - | 2783335..2784456 (-) | 1122 | WP_339193049.1 | M14 family metallocarboxypeptidase | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 40517.38 Da Isoelectric Point: 8.6397
>NTDB_id=964474 NSU02_RS13510 WP_130156359.1 2779282..2780349(-) (comGA) [Aeribacillus sp. FSL W8-0870]
MIEIEKLSEKLIELACSFSASDIHIVPKKKKAVIQFRIDDDIKEIFHLPKAICERLISHFKFMAQMDIGEKRRPQNGAYS
FHTIYGEVHLRLSTLPTVFDESLVIRILLEQSIQTPEKLSLFPSESKKMLSFLKHSHGLLILTGPTGSGKTTTLYSLLHY
AKKHFKRNIITLEDPVETKSDEMLQVQINEKAGITYANGLKAILRHDPDVIMVGEIRDHETARIAVRAGLSGHLVLTTMH
TRDAKGAIYRLLEFGVTFSEIEQTLIAVAAQRLVHLICPFCKGNCPPYCKKLKEIRRIGVYELLYGKNLTAAIREAKGEE
QSELDYMKLKDVIKKGIALGYLYPDIYDRWVFEYE
MIEIEKLSEKLIELACSFSASDIHIVPKKKKAVIQFRIDDDIKEIFHLPKAICERLISHFKFMAQMDIGEKRRPQNGAYS
FHTIYGEVHLRLSTLPTVFDESLVIRILLEQSIQTPEKLSLFPSESKKMLSFLKHSHGLLILTGPTGSGKTTTLYSLLHY
AKKHFKRNIITLEDPVETKSDEMLQVQINEKAGITYANGLKAILRHDPDVIMVGEIRDHETARIAVRAGLSGHLVLTTMH
TRDAKGAIYRLLEFGVTFSEIEQTLIAVAAQRLVHLICPFCKGNCPPYCKKLKEIRRIGVYELLYGKNLTAAIREAKGEE
QSELDYMKLKDVIKKGIALGYLYPDIYDRWVFEYE
Nucleotide
Download Length: 1068 bp
>NTDB_id=964474 NSU02_RS13510 WP_130156359.1 2779282..2780349(-) (comGA) [Aeribacillus sp. FSL W8-0870]
ATGATTGAAATTGAAAAGCTTAGCGAAAAACTGATTGAACTGGCGTGTTCATTTAGTGCCTCAGACATCCATATTGTTCC
GAAAAAGAAAAAAGCAGTTATTCAATTTCGAATTGACGATGACATCAAAGAAATATTTCATCTGCCAAAAGCTATTTGTG
AACGCTTAATTTCTCATTTTAAATTTATGGCCCAAATGGATATTGGCGAAAAAAGGCGTCCGCAAAACGGTGCTTACTCC
TTCCATACGATTTACGGAGAGGTGCATCTTCGTTTATCGACATTGCCTACAGTATTCGATGAAAGTCTAGTCATCCGAAT
ATTGCTAGAGCAATCGATTCAAACGCCTGAAAAACTTTCATTGTTCCCGTCAGAATCCAAAAAAATGCTTTCATTTTTAA
AGCATTCTCACGGTCTCCTGATCCTTACCGGTCCGACCGGTTCGGGAAAAACGACCACTCTTTATTCGCTTCTCCATTAT
GCAAAAAAACATTTTAAAAGAAACATCATCACACTTGAAGATCCTGTGGAAACGAAAAGCGATGAAATGCTTCAAGTGCA
GATCAATGAAAAAGCTGGAATTACGTATGCAAATGGGTTAAAAGCAATATTAAGACATGATCCGGATGTCATTATGGTCG
GTGAAATTCGAGATCATGAGACAGCAAGGATTGCGGTCCGGGCTGGGCTTAGCGGACATTTAGTACTGACCACCATGCAT
ACGCGGGATGCAAAGGGAGCTATTTATCGATTATTAGAATTTGGTGTAACCTTTTCCGAAATTGAGCAAACTTTGATCGC
TGTTGCTGCGCAGCGTCTCGTTCATTTAATATGCCCGTTTTGCAAAGGGAATTGCCCGCCTTATTGCAAAAAATTAAAGG
AAATTAGGAGAATTGGGGTCTATGAACTTCTTTACGGCAAAAATTTAACCGCCGCTATTCGGGAAGCAAAAGGAGAGGAG
CAGAGTGAGTTAGATTATATGAAGTTAAAAGATGTAATTAAAAAAGGAATCGCTCTTGGGTATTTATATCCGGACATATA
TGATCGTTGGGTGTTTGAATATGAATAG
ATGATTGAAATTGAAAAGCTTAGCGAAAAACTGATTGAACTGGCGTGTTCATTTAGTGCCTCAGACATCCATATTGTTCC
GAAAAAGAAAAAAGCAGTTATTCAATTTCGAATTGACGATGACATCAAAGAAATATTTCATCTGCCAAAAGCTATTTGTG
AACGCTTAATTTCTCATTTTAAATTTATGGCCCAAATGGATATTGGCGAAAAAAGGCGTCCGCAAAACGGTGCTTACTCC
TTCCATACGATTTACGGAGAGGTGCATCTTCGTTTATCGACATTGCCTACAGTATTCGATGAAAGTCTAGTCATCCGAAT
ATTGCTAGAGCAATCGATTCAAACGCCTGAAAAACTTTCATTGTTCCCGTCAGAATCCAAAAAAATGCTTTCATTTTTAA
AGCATTCTCACGGTCTCCTGATCCTTACCGGTCCGACCGGTTCGGGAAAAACGACCACTCTTTATTCGCTTCTCCATTAT
GCAAAAAAACATTTTAAAAGAAACATCATCACACTTGAAGATCCTGTGGAAACGAAAAGCGATGAAATGCTTCAAGTGCA
GATCAATGAAAAAGCTGGAATTACGTATGCAAATGGGTTAAAAGCAATATTAAGACATGATCCGGATGTCATTATGGTCG
GTGAAATTCGAGATCATGAGACAGCAAGGATTGCGGTCCGGGCTGGGCTTAGCGGACATTTAGTACTGACCACCATGCAT
ACGCGGGATGCAAAGGGAGCTATTTATCGATTATTAGAATTTGGTGTAACCTTTTCCGAAATTGAGCAAACTTTGATCGC
TGTTGCTGCGCAGCGTCTCGTTCATTTAATATGCCCGTTTTGCAAAGGGAATTGCCCGCCTTATTGCAAAAAATTAAAGG
AAATTAGGAGAATTGGGGTCTATGAACTTCTTTACGGCAAAAATTTAACCGCCGCTATTCGGGAAGCAAAAGGAGAGGAG
CAGAGTGAGTTAGATTATATGAAGTTAAAAGATGTAATTAAAAAAGGAATCGCTCTTGGGTATTTATATCCGGACATATA
TGATCGTTGGGTGTTTGAATATGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
62.323 |
99.437 |
0.62 |
| pilB | Glaesserella parasuis strain SC1401 |
40.058 |
96.338 |
0.386 |
| pilF | Thermus thermophilus HB27 |
42.809 |
84.225 |
0.361 |