Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   NSS90_RS19850 Genome accession   NZ_CP150161
Coordinates   3809668..3809787 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus sp. PS93     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3804668..3814787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS90_RS19825 (NSS90_19825) albG 3804831..3805532 (+) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  NSS90_RS19830 (NSS90_19830) - 3805538..3806914 (-) 1377 WP_339175445.1 YncE family protein -
  NSS90_RS19835 (NSS90_19835) - 3806954..3808309 (-) 1356 WP_088327185.1 YncE family protein -
  NSS90_RS19840 (NSS90_19840) - 3808306..3808536 (-) 231 WP_326256832.1 hypothetical protein -
  NSS90_RS19845 (NSS90_19845) rapF 3808539..3809684 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  NSS90_RS19850 (NSS90_19850) phrF 3809668..3809787 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  NSS90_RS19855 (NSS90_19855) - 3809901..3810315 (+) 415 Protein_3853 YbaK/EbsC family protein -
  NSS90_RS19860 (NSS90_19860) speB 3810383..3811255 (-) 873 WP_015250983.1 agmatinase -
  NSS90_RS19865 (NSS90_19865) speE 3811316..3812146 (-) 831 WP_167408507.1 spermidine synthase -
  NSS90_RS19870 (NSS90_19870) - 3812348..3814423 (+) 2076 WP_167408508.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=964184 NSS90_RS19850 WP_009968329.1 3809668..3809787(+) (phrF) [Bacillus sp. PS93]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=964184 NSS90_RS19850 WP_009968329.1 3809668..3809787(+) (phrF) [Bacillus sp. PS93]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment