Detailed information NTG0964183

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NSS90_RS19845
• Genome accession: NZ_CP150161
• Coordinates: 3808539..3809684 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus sp. PS93
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3803539..3814684

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSS90_RS19820 (NSS90_19820)	-	3803554..3804834 (+)	1281	WP_227058171.1	pitrilysin family protein	-
NSS90_RS19825 (NSS90_19825)	albG	3804831..3805532 (+)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NSS90_RS19830 (NSS90_19830)	-	3805538..3806914 (-)	1377	WP_339175445.1	YncE family protein	-
NSS90_RS19835 (NSS90_19835)	-	3806954..3808309 (-)	1356	WP_088327185.1	YncE family protein	-
NSS90_RS19840 (NSS90_19840)	-	3808306..3808536 (-)	231	WP_326256832.1	hypothetical protein	-
NSS90_RS19845 (NSS90_19845)	rapF	3808539..3809684 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
NSS90_RS19850 (NSS90_19850)	phrF	3809668..3809787 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NSS90_RS19855 (NSS90_19855)	-	3809901..3810315 (+)	415	Protein_3853	YbaK/EbsC family protein	-
NSS90_RS19860 (NSS90_19860)	speB	3810383..3811255 (-)	873	WP_015250983.1	agmatinase	-
NSS90_RS19865 (NSS90_19865)	speE	3811316..3812146 (-)	831	WP_167408507.1	spermidine synthase	-
NSS90_RS19870 (NSS90_19870)	-	3812348..3814423 (+)	2076	WP_167408508.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=964183 NSS90_RS19845 WP_029318693.1 3808539..3809684(+) (rapF) [Bacillus sp. PS93]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=964183 NSS90_RS19845 WP_029318693.1 3808539..3809684(+) (rapF) [Bacillus sp. PS93]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572