Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   NSQ83_RS19760 Genome accession   NZ_CP150157
Coordinates   3808952..3809071 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus sp. PS217     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3803952..3814071
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ83_RS19735 (NSQ83_19735) albG 3804115..3804816 (+) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  NSQ83_RS19740 (NSQ83_19740) - 3804822..3806198 (-) 1377 WP_198878427.1 YncE family protein -
  NSQ83_RS19745 (NSQ83_19745) - 3806238..3807593 (-) 1356 WP_069322965.1 YncE family protein -
  NSQ83_RS19750 (NSQ83_19750) - 3807590..3807820 (-) 231 WP_069703618.1 hypothetical protein -
  NSQ83_RS19755 (NSQ83_19755) rapF 3807823..3808968 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  NSQ83_RS19760 (NSQ83_19760) phrF 3808952..3809071 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  NSQ83_RS19765 (NSQ83_19765) - 3809187..3809635 (+) 449 Protein_3835 YbaK/EbsC family protein -
  NSQ83_RS19770 (NSQ83_19770) speB 3809666..3810538 (-) 873 WP_198878426.1 agmatinase -
  NSQ83_RS19775 (NSQ83_19775) speE 3810599..3811429 (-) 831 WP_003227543.1 spermidine synthase -
  NSQ83_RS19780 (NSQ83_19780) - 3811632..3813707 (+) 2076 WP_038427996.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=963861 NSQ83_RS19760 WP_009968329.1 3808952..3809071(+) (phrF) [Bacillus sp. PS217]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=963861 NSQ83_RS19760 WP_009968329.1 3808952..3809071(+) (phrF) [Bacillus sp. PS217]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487