Detailed information NTG0963860

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NSQ83_RS19755
• Genome accession: NZ_CP150157
• Coordinates: 3807823..3808968 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus sp. PS217
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3802823..3813968

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ83_RS19730 (NSQ83_19730)	-	3802838..3804118 (+)	1281	WP_032722698.1	pitrilysin family protein	-
NSQ83_RS19735 (NSQ83_19735)	albG	3804115..3804816 (+)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NSQ83_RS19740 (NSQ83_19740)	-	3804822..3806198 (-)	1377	WP_198878427.1	YncE family protein	-
NSQ83_RS19745 (NSQ83_19745)	-	3806238..3807593 (-)	1356	WP_069322965.1	YncE family protein	-
NSQ83_RS19750 (NSQ83_19750)	-	3807590..3807820 (-)	231	WP_069703618.1	hypothetical protein	-
NSQ83_RS19755 (NSQ83_19755)	rapF	3807823..3808968 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
NSQ83_RS19760 (NSQ83_19760)	phrF	3808952..3809071 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NSQ83_RS19765 (NSQ83_19765)	-	3809187..3809635 (+)	449	Protein_3835	YbaK/EbsC family protein	-
NSQ83_RS19770 (NSQ83_19770)	speB	3809666..3810538 (-)	873	WP_198878426.1	agmatinase	-
NSQ83_RS19775 (NSQ83_19775)	speE	3810599..3811429 (-)	831	WP_003227543.1	spermidine synthase	-
NSQ83_RS19780 (NSQ83_19780)	-	3811632..3813707 (+)	2076	WP_038427996.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=963860 NSQ83_RS19755 WP_029318693.1 3807823..3808968(+) (rapF) [Bacillus sp. PS217]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=963860 NSQ83_RS19755 WP_029318693.1 3807823..3808968(+) (rapF) [Bacillus sp. PS217]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572