Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSQ83_RS12520 | Genome accession | NZ_CP150157 |
| Coordinates | 2438792..2439862 (-) | Length | 356 a.a. |
| NCBI ID | WP_129134318.1 | Uniprot ID | - |
| Organism | Bacillus sp. PS217 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2433792..2444862
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ83_RS12475 (NSQ83_12475) | tapA | 2434271..2435032 (-) | 762 | WP_198878634.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSQ83_RS12480 (NSQ83_12480) | - | 2435304..2435630 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NSQ83_RS12485 (NSQ83_12485) | - | 2435672..2435851 (-) | 180 | WP_072175549.1 | YqzE family protein | - |
| NSQ83_RS12490 (NSQ83_12490) | comGG | 2435922..2436296 (-) | 375 | WP_133953114.1 | ComG operon protein ComGG | Machinery gene |
| NSQ83_RS12495 (NSQ83_12495) | comGF | 2436297..2436680 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| NSQ83_RS12500 (NSQ83_12500) | comGE | 2436706..2437053 (-) | 348 | WP_080529537.1 | ComG operon protein 5 | Machinery gene |
| NSQ83_RS12505 (NSQ83_12505) | comGD | 2437037..2437468 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| NSQ83_RS12510 (NSQ83_12510) | comGC | 2437458..2437754 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NSQ83_RS12515 (NSQ83_12515) | comGB | 2437768..2438805 (-) | 1038 | WP_044052501.1 | comG operon protein ComGB | Machinery gene |
| NSQ83_RS12520 (NSQ83_12520) | comGA | 2438792..2439862 (-) | 1071 | WP_129134318.1 | competence protein ComGA | Machinery gene |
| NSQ83_RS12525 (NSQ83_12525) | - | 2440074..2440271 (-) | 198 | WP_129134319.1 | hypothetical protein | - |
| NSQ83_RS12530 (NSQ83_12530) | corA | 2440273..2441226 (-) | 954 | WP_198878633.1 | magnesium transporter CorA | - |
| NSQ83_RS12535 (NSQ83_12535) | - | 2441369..2442694 (+) | 1326 | WP_198878632.1 | hemolysin family protein | - |
| NSQ83_RS12540 (NSQ83_12540) | rsbRD | 2442751..2443587 (-) | 837 | WP_015714260.1 | RsbT co-antagonist protein RsbRD | - |
| NSQ83_RS12550 (NSQ83_12550) | mgsR | 2443811..2444191 (-) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| NSQ83_RS12555 (NSQ83_12555) | - | 2444423..2444668 (+) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40442.58 Da Isoelectric Point: 9.1529
>NTDB_id=963835 NSQ83_RS12520 WP_129134318.1 2438792..2439862(-) (comGA) [Bacillus sp. PS217]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEESVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEESVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=963835 NSQ83_RS12520 WP_129134318.1 2438792..2439862(-) (comGA) [Bacillus sp. PS217]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGAGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACTAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGAGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACTAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
99.719 |
100 |
0.997 |
| pilF | Thermus thermophilus HB27 |
36.827 |
99.157 |
0.365 |