Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGE   Type   Machinery gene
Locus tag   NST22_RS12525 Genome accession   NZ_CP150156
Coordinates   2444735..2445082 (-) Length   115 a.a.
NCBI ID   WP_003230165.1    Uniprot ID   A0AAE2SKU3
Organism   Bacillus sp. PS237     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2439735..2450082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST22_RS12480 (NST22_12480) sinI 2440260..2440433 (+) 174 WP_003230187.1 anti-repressor SinI family protein Regulator
  NST22_RS12485 (NST22_12485) sinR 2440467..2440802 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  NST22_RS12490 (NST22_12490) tasA 2440895..2441680 (-) 786 WP_003230183.1 biofilm matrix protein TasA -
  NST22_RS12495 (NST22_12495) - 2441744..2442316 (-) 573 WP_003230181.1 signal peptidase I -
  NST22_RS12500 (NST22_12500) tapA 2442300..2443061 (-) 762 WP_003230180.1 amyloid fiber anchoring/assembly protein TapA -
  NST22_RS12505 (NST22_12505) - 2443333..2443659 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  NST22_RS12510 (NST22_12510) - 2443701..2443880 (-) 180 WP_003230176.1 YqzE family protein -
  NST22_RS12515 (NST22_12515) comGG 2443951..2444325 (-) 375 WP_003230170.1 ComG operon protein ComGG Machinery gene
  NST22_RS12520 (NST22_12520) comGF 2444326..2444709 (-) 384 WP_003230168.1 ComG operon protein ComGF Machinery gene
  NST22_RS12525 (NST22_12525) comGE 2444735..2445082 (-) 348 WP_003230165.1 ComG operon protein 5 Machinery gene
  NST22_RS12530 (NST22_12530) comGD 2445066..2445497 (-) 432 WP_004398628.1 comG operon protein ComGD Machinery gene
  NST22_RS12535 (NST22_12535) comGC 2445487..2445783 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  NST22_RS12540 (NST22_12540) comGB 2445797..2446834 (-) 1038 WP_009967727.1 comG operon protein ComGB Machinery gene
  NST22_RS12545 (NST22_12545) comGA 2446821..2447891 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  NST22_RS12550 (NST22_12550) corA 2448303..2449256 (-) 954 WP_004399136.1 magnesium transporter CorA -

Sequence

Protein


Download         Length: 115 a.a.        Molecular weight: 13271.33 Da        Isoelectric Point: 5.1901

>NTDB_id=963750 NST22_RS12525 WP_003230165.1 2444735..2445082(-) (comGE) [Bacillus sp. PS237]
MWRENKGFSTIETMSALSLWLFVLLTVVPLWDKLMADEKMAESREIGYQMMNESISKYVMSGEGAASKTITKNNHIYAMK
WEEEGEYQNVCIKAAAYKEKSFCLSILQTEWLHAS

Nucleotide


Download         Length: 348 bp        

>NTDB_id=963750 NST22_RS12525 WP_003230165.1 2444735..2445082(-) (comGE) [Bacillus sp. PS237]
ATGTGGAGAGAAAATAAAGGTTTTTCTACAATAGAAACAATGTCTGCGCTAAGCCTGTGGCTGTTTGTGCTGCTGACAGT
CGTCCCCTTGTGGGACAAGCTGATGGCTGATGAAAAAATGGCGGAATCACGAGAAATTGGCTATCAGATGATGAATGAGA
GCATTAGCAAATATGTCATGAGTGGTGAAGGAGCCGCGTCAAAAACGATTACAAAGAACAATCATATCTATGCAATGAAG
TGGGAGGAGGAGGGCGAATATCAAAACGTATGTATCAAAGCCGCAGCTTATAAAGAAAAATCATTTTGCCTCAGCATTTT
GCAGACAGAATGGCTACACGCTTCTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGE Bacillus subtilis subsp. subtilis str. 168

100

100

1