Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSQ16_RS02170 Genome accession   NZ_CP150155
Coordinates   428629..429579 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus sp. PS108     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 423629..434579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ16_RS02145 (NSQ16_02145) rapC 425088..426236 (+) 1149 WP_015252823.1 response regulator aspartate phosphatase RapC Regulator
  NSQ16_RS02150 (NSQ16_02150) phrC 426220..426342 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  NSQ16_RS02155 (NSQ16_02155) - 426442..426531 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  NSQ16_RS02160 (NSQ16_02160) - 426613..426726 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  NSQ16_RS02165 (NSQ16_02165) - 426880..428244 (-) 1365 WP_230488159.1 aspartate kinase -
  NSQ16_RS02170 (NSQ16_02170) ceuB 428629..429579 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  NSQ16_RS02175 (NSQ16_02175) yclO 429572..430519 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  NSQ16_RS02180 (NSQ16_02180) yclP 430513..431271 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  NSQ16_RS02185 (NSQ16_02185) yclQ 431293..432246 (+) 954 WP_230488158.1 petrobactin ABC transporter substrate-binding protein YclQ -
  NSQ16_RS02190 (NSQ16_02190) - 432293..433711 (-) 1419 WP_003246604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=963633 NSQ16_RS02170 WP_014475804.1 428629..429579(+) (ceuB) [Bacillus sp. PS108]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=963633 NSQ16_RS02170 WP_014475804.1 428629..429579(+) (ceuB) [Bacillus sp. PS108]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525