Detailed information NTG0963631

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NSQ16_RS02145
• Genome accession: NZ_CP150155
• Coordinates: 425088..426236 (+)
• Length: 382 a.a.
• NCBI ID: WP_015252823.1
• Uniprot ID: -
• Organism: Bacillus sp. PS108
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 420088..431236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ16_RS02125 (NSQ16_02125)	-	420458..421138 (-)	681	WP_014662766.1	ABC transporter ATP-binding protein	-
NSQ16_RS02130 (NSQ16_02130)	-	421154..422620 (-)	1467	WP_128480738.1	ABC transporter permease	-
NSQ16_RS02135 (NSQ16_02135)	yclJ	422833..423516 (+)	684	WP_015482792.1	two-component system response regulator YclJ	-
NSQ16_RS02140 (NSQ16_02140)	yclK	423503..424924 (+)	1422	WP_230488160.1	two-component system sensor histidine kinase YclK	-
NSQ16_RS02145 (NSQ16_02145)	rapC	425088..426236 (+)	1149	WP_015252823.1	response regulator aspartate phosphatase RapC	Regulator
NSQ16_RS02150 (NSQ16_02150)	phrC	426220..426342 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
NSQ16_RS02155 (NSQ16_02155)	-	426442..426531 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
NSQ16_RS02160 (NSQ16_02160)	-	426613..426726 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
NSQ16_RS02165 (NSQ16_02165)	-	426880..428244 (-)	1365	WP_230488159.1	aspartate kinase	-
NSQ16_RS02170 (NSQ16_02170)	ceuB	428629..429579 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
NSQ16_RS02175 (NSQ16_02175)	yclO	429572..430519 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45677.71 Da
• Isoelectric Point: 5.0423

>NTDB_id=963631 NSQ16_RS02145 WP_015252823.1 425088..426236(+) (rapC) [Bacillus sp. PS108]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKRGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=963631 NSQ16_RS02145 WP_015252823.1 425088..426236(+) (rapC) [Bacillus sp. PS108]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATTGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
CCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATCACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACTTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACGGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568