Detailed information NTG0963335

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: NST94_RS27070
• Genome accession: NZ_CP150146
• Coordinates: 6202796..6204163 (-)
• Length: 455 a.a.
• NCBI ID: WP_036680472.1
• Uniprot ID: A0A1R0YRV5
• Organism: Paenibacillus sp. FSL H8-0282
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6197796..6209163

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NST94_RS27045 (NST94_27045)	ispF	6198359..6198847 (-)	489	WP_036680486.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
NST94_RS27050 (NST94_27050)	ispD	6198844..6199542 (-)	699	WP_076130021.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
NST94_RS27055 (NST94_27055)	-	6199638..6200726 (-)	1089	WP_036680481.1	PIN/TRAM domain-containing protein	-
NST94_RS27060 (NST94_27060)	pssA	6200904..6201641 (-)	738	WP_036680477.1	CDP-diacylglycerol--serine O-phosphatidyltransferase	-
NST94_RS27065 (NST94_27065)	disA	6201706..6202782 (-)	1077	WP_036680475.1	DNA integrity scanning diadenylate cyclase DisA	-
NST94_RS27070 (NST94_27070)	radA	6202796..6204163 (-)	1368	WP_036680472.1	DNA repair protein RadA	Machinery gene
NST94_RS27075 (NST94_27075)	clpC	6204350..6206818 (-)	2469	WP_036680471.1	ATP-dependent protease ATP-binding subunit ClpC	-
NST94_RS27080 (NST94_27080)	-	6206854..6207918 (-)	1065	WP_036680469.1	protein arginine kinase	-
NST94_RS27085 (NST94_27085)	-	6207947..6208471 (-)	525	WP_036680467.1	UvrB/UvrC motif-containing protein	-
NST94_RS27090 (NST94_27090)	-	6208502..6208963 (-)	462	WP_036680465.1	CtsR family transcriptional regulator	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 49750.55 Da
• Isoelectric Point: 6.4197

>NTDB_id=963335 NST94_RS27070 WP_036680472.1 6202796..6204163(-) (radA) [Paenibacillus sp. FSL H8-0282]
MAKAKTKFFCTDCGYESPKWFGKCPGCQAWNSMVEETESVVKTQGMNAPIFHSKEKAQSIISIESDKEPRILTGIGELNR
VLGGGIVPGSLVLVGGDPGIGKSTLLLQTSHALTTQGLRVLYISGEESVRQTKLRADRLDALSTELYVLCETNMESIEEA
IEQIQPQFLVIDSIQTVFMPEVTSAPGSVTQVRECTTRFMRIAKIRGIATVLVGHVTKEGAIAGPRMLEHMVDCVLYFEG
ERHHTYRLLRAVKNRFGSTNEIGIFEMGEAGLTEVENPSELFLSERPLGVAGSTVVASMEGTRPVLVELQALVAATHFPS
PRRMCTGMDHQRMALIIAVLEKRMGMFLQNQDAYLNVAGGVKLDEPAIDLAVAISIASSFRDISTKPYDVFFGEVGLTGE
VRGVSRAEMRVKEAAKLGFRRVIMPEKSMKGWKHPQDIQIIGVSTVADALSVALD

Nucleotide

• Length: 1368 bp

>NTDB_id=963335 NST94_RS27070 WP_036680472.1 6202796..6204163(-) (radA) [Paenibacillus sp. FSL H8-0282]
ATGGCTAAAGCAAAAACAAAATTTTTTTGCACCGACTGTGGATACGAATCGCCAAAATGGTTCGGGAAATGCCCAGGGTG
CCAGGCTTGGAACTCCATGGTGGAGGAAACGGAAAGCGTAGTCAAAACACAGGGAATGAATGCCCCTATTTTTCATAGTA
AAGAAAAGGCACAGTCGATCATAAGTATAGAAAGTGACAAGGAACCGCGCATACTGACAGGTATAGGTGAGCTTAACCGT
GTTCTCGGTGGGGGGATCGTACCAGGATCGCTGGTACTAGTAGGGGGAGACCCAGGAATCGGTAAATCTACGCTCTTATT
ACAGACCTCTCACGCCCTTACAACACAGGGATTGCGAGTACTGTATATCTCGGGCGAAGAATCGGTAAGGCAAACTAAGC
TGCGCGCGGATCGCCTCGATGCGTTGTCAACGGAGCTTTATGTACTATGTGAGACAAATATGGAAAGCATAGAAGAAGCG
ATCGAACAAATCCAGCCACAATTTCTTGTCATCGATTCTATTCAGACCGTATTTATGCCAGAAGTAACGAGTGCGCCAGG
CAGCGTGACCCAGGTTCGGGAGTGTACGACAAGATTTATGCGTATCGCTAAGATTCGTGGAATTGCAACAGTTCTCGTTG
GTCATGTTACCAAGGAAGGGGCTATTGCTGGACCACGGATGCTTGAACATATGGTGGACTGCGTGCTGTATTTTGAGGGT
GAGCGGCATCATACGTATAGACTTTTGCGGGCTGTAAAAAACCGCTTTGGCTCTACGAATGAAATCGGCATTTTCGAAAT
GGGTGAAGCGGGGCTTACCGAAGTAGAGAATCCATCGGAGCTCTTTTTATCGGAACGTCCGCTTGGCGTGGCTGGTTCTA
CTGTGGTGGCAAGTATGGAGGGAACTAGACCTGTGCTTGTAGAACTTCAGGCACTTGTTGCTGCCACCCACTTCCCTTCC
CCACGGCGAATGTGCACAGGCATGGATCACCAGCGGATGGCACTTATTATCGCTGTACTCGAGAAACGGATGGGCATGTT
CCTGCAGAATCAGGATGCATACCTTAATGTTGCCGGGGGAGTAAAGCTGGATGAACCGGCGATTGATCTAGCTGTAGCTA
TTAGTATCGCCTCCAGTTTTCGTGATATTTCAACAAAACCTTACGACGTTTTCTTCGGAGAAGTAGGACTTACCGGTGAG
GTAAGAGGCGTTTCGCGCGCGGAAATGCGCGTTAAGGAGGCCGCAAAACTTGGCTTCCGGCGGGTGATTATGCCTGAAAA
GAGCATGAAGGGATGGAAGCACCCGCAAGATATCCAGATTATTGGCGTCAGTACCGTAGCAGATGCACTATCGGTCGCGT
TAGATTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (77-220)

• Subunit ChlI of Mg-chelatase (ChlI) (345-427)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-35)

3D structure

• AlphaFold DB: A0A1R0YRV5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	66.231	100	0.668
radA	Streptococcus mitis NCTC 12261	58.444	98.901	0.578
radA	Streptococcus pneumoniae Rx1	58.444	98.901	0.578
radA	Streptococcus pneumoniae D39	58.444	98.901	0.578
radA	Streptococcus pneumoniae R6	58.444	98.901	0.578
radA	Streptococcus pneumoniae TIGR4	58.444	98.901	0.578
radA	Streptococcus mitis SK321	58.444	98.901	0.578