Detailed information NTG0962858

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: WHK83_RS16890
• Genome accession: NZ_CP150097
• Coordinates: 3588469..3589890 (+)
• Length: 473 a.a.
• NCBI ID: WP_023897413.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain HAU425
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3583469..3594890

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHK83_RS16870	thrC	3583723..3584862 (+)	1140	WP_000063593.1	threonine synthase	-
WHK83_RS16875	pbpG	3584971..3586017 (-)	1047	WP_031946417.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
WHK83_RS16880	-	3586230..3586865 (+)	636	WP_000633799.1	response regulator	-
WHK83_RS16885	pilS	3586876..3588444 (+)	1569	WP_001160339.1	PAS domain-containing sensor histidine kinase	Regulator
WHK83_RS16890	pilR	3588469..3589890 (+)	1422	WP_023897413.1	sigma-54 dependent transcriptional regulator	Regulator
WHK83_RS16895	-	3589894..3591078 (-)	1185	WP_000939109.1	S41 family peptidase	-
WHK83_RS16900	gpmI	3591094..3592641 (-)	1548	WP_023897414.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
WHK83_RS16905	lptG	3592767..3593837 (-)	1071	WP_000881094.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 52962.16 Da
• Isoelectric Point: 6.5058

>NTDB_id=962858 WHK83_RS16890 WP_023897413.1 3588469..3589890(+) (pilR) [Acinetobacter baumannii strain HAU425]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLDLVKHVSQNYPNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKVEPDFAESALENKLLIGCSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGEDVLL
LANHFIQKICMEWETPPKQLTEAAETYLLQQHFPGNVRELRNMIERAITLSEDTTIDVSHLHPAPLRANISNPFASAAQS
IQTTVAAPQVVKKLPSEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV

Nucleotide

• Length: 1422 bp

>NTDB_id=962858 WHK83_RS16890 WP_023897413.1 3588469..3589890(+) (pilR) [Acinetobacter baumannii strain HAU425]
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACACAGTTTCATTACGATGCATGTT
TAACCGATCTAAACTTACCCGATGGGAGTGGGTTAGACTTAGTCAAACATGTCTCTCAAAATTATCCCAACACTCCGATT
GCGGTTTTAACTGCTTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGTGCTTTTGATTTTGTAAGCAAACC
GGTCAACCAAGTACATCTAGATCAATTATTACAAAAAGCCTTGAATCGGCAAAAAGTAGAGCCTGATTTTGCCGAGAGTG
CTTTAGAAAACAAATTATTAATCGGTTGTTCTCTGCCTATTCAACAATTACGCATCGCAATTAAAAAAATTGCTCGCTCT
CAAGCACCGGTATTTGTTACCGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCTAACTTAGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCAATTAACTGCGGTGCCATTCCAACCGAACTCATGGAAAGTGAGCTTTTTGGGCATAAAA
AAGGGAGCTTTACCGGAGCAACTCAAGATAAACAAGGCCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGCGCAGTACAGGAAAAAAAGATCCGACCTGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTAATTAGTGCAAGTCATCAAGATTTAGATTTATTGGTTAGACAAGGTAAATTCC
GTCAAGATTTATTCTTCCGTATTCATGTTATGGACCTCATATTGCCACCTCTACGTGAACGTGGCGAAGATGTCCTTTTA
CTAGCCAATCACTTTATTCAGAAAATTTGTATGGAGTGGGAAACACCACCTAAACAATTAACAGAAGCGGCCGAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGCGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGATA
CCACTATAGATGTATCTCATTTACATCCTGCTCCACTAAGAGCAAATATTTCTAATCCTTTTGCTTCAGCTGCTCAAAGC
ATACAAACCACTGTGGCAGCTCCTCAAGTCGTAAAAAAATTACCAAGTGAAGGCTTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTACTCAATGCACTCAATATGACTCATTGGAATCGTACCTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTCGGCTTAGATACGGAGACAGAACAGGAAGTATAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	98.309	100	0.983
pilR	Pseudomonas aeruginosa PAK	51.416	97.04	0.499