Detailed information NTG0962045

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: WGQ50_RS05100
• Genome accession: NZ_CP149884
• Coordinates: 988862..989599 (+)
• Length: 245 a.a.
• NCBI ID: WP_002780246.1
• Uniprot ID: A0A5T1L8T6
• Organism: Campylobacter coli strain NPRC(S) 01.13898
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 983862..994599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WGQ50_RS05070 (WGQ50_05070)	rpsF	984009..984386 (+)	378	WP_002777082.1	30S ribosomal protein S6	-
WGQ50_RS05075 (WGQ50_05075)	-	984395..984943 (+)	549	WP_052780253.1	single-stranded DNA-binding protein	-
WGQ50_RS05080 (WGQ50_05080)	rpsR	984954..985214 (+)	261	WP_002777087.1	30S ribosomal protein S18	-
WGQ50_RS05085 (WGQ50_05085)	lon	985270..987645 (-)	2376	WP_002783351.1	endopeptidase La	-
WGQ50_RS05090 (WGQ50_05090)	bamD	987661..988308 (-)	648	WP_002780248.1	outer membrane protein assembly factor BamD	-
WGQ50_RS05095 (WGQ50_05095)	fliW	988473..988862 (+)	390	WP_002777093.1	flagellar assembly protein FliW	-
WGQ50_RS05100 (WGQ50_05100)	proC	988862..989599 (+)	738	WP_002780246.1	pyrroline-5-carboxylate reductase	Machinery gene
WGQ50_RS05105 (WGQ50_05105)	-	989596..989901 (+)	306	WP_002790525.1	hypothetical protein	-
WGQ50_RS05110 (WGQ50_05110)	-	989894..990562 (+)	669	WP_002790524.1	hypothetical protein	-
WGQ50_RS05115 (WGQ50_05115)	-	990559..991011 (+)	453	WP_002777117.1	hypothetical protein	-
WGQ50_RS05120 (WGQ50_05120)	-	991004..991633 (-)	630	WP_002783358.1	uroporphyrinogen-III synthase	-
WGQ50_RS05125 (WGQ50_05125)	thiE	991611..992243 (-)	633	WP_002783359.1	thiamine phosphate synthase	-
WGQ50_RS05130 (WGQ50_05130)	thiD	992233..993045 (-)	813	WP_002822374.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
WGQ50_RS05135 (WGQ50_05135)	-	993045..993728 (-)	684	WP_060785324.1	3-methyladenine DNA glycosylase	-
WGQ50_RS05140 (WGQ50_05140)	-	993725..994486 (-)	762	WP_072212081.1	ATP-binding protein	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26797.20 Da
• Isoelectric Point: 9.3032

>NTDB_id=962045 WGQ50_RS05100 WP_002780246.1 988862..989599(+) (proC) [Campylobacter coli strain NPRC(S) 01.13898]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=962045 WGQ50_RS05100 WP_002780246.1 988862..989599(+) (proC) [Campylobacter coli strain NPRC(S) 01.13898]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAGGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

3D structure

• AlphaFold DB: A0A5T1L8T6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.833	97.959	0.792