Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   WKU69_RS02930 Genome accession   NZ_CP149838
Coordinates   628070..628480 (+) Length   136 a.a.
NCBI ID   WP_005112082.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 2024CK-00130     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 623070..633480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKU69_RS02915 (WKU69_02915) - 624059..626365 (+) 2307 WP_000259109.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  WKU69_RS02920 (WKU69_02920) - 626410..627183 (-) 774 WP_000682844.1 SDR family oxidoreductase -
  WKU69_RS02925 (WKU69_02925) mazG 627295..628101 (+) 807 WP_000359489.1 nucleoside triphosphate pyrophosphohydrolase -
  WKU69_RS02930 (WKU69_02930) comEA 628070..628480 (+) 411 WP_005112082.1 ComEA family DNA-binding protein Machinery gene
  WKU69_RS02935 (WKU69_02935) pcnB 628605..630068 (+) 1464 WP_192897303.1 polynucleotide adenylyltransferase PcnB -
  WKU69_RS02940 (WKU69_02940) folK 630065..630547 (+) 483 WP_000219217.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  WKU69_RS02945 (WKU69_02945) panB 630593..631402 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  WKU69_RS02950 (WKU69_02950) panC 631406..632254 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  WKU69_RS02955 (WKU69_02955) rapZ 632277..633128 (+) 852 WP_000821671.1 RNase adapter RapZ -
  WKU69_RS02960 (WKU69_02960) - 633125..633394 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15654.94 Da        Isoelectric Point: 10.4475

>NTDB_id=961866 WKU69_RS02930 WP_005112082.1 628070..628480(+) (comEA) [Acinetobacter baumannii strain 2024CK-00130]
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDKNFQEWKAKQQMYDQKLNISKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=961866 WKU69_RS02930 WP_005112082.1 628070..628480(+) (comEA) [Acinetobacter baumannii strain 2024CK-00130]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCCATTTTTGAAAAAAATAAATCACGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii D1279779

96.324

100

0.963
  comEA Acinetobacter baumannii strain A118

95.588

100

0.956
  comEA Acinetobacter baylyi ADP1

41.985

96.324

0.404