Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   WKI13_RS19990 Genome accession   NZ_CP149817
Coordinates   4996064..4996459 (-) Length   131 a.a.
NCBI ID   WP_015818072.1    Uniprot ID   -
Organism   Teredinibacter turnerae strain T7902     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4991064..5001459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKI13_RS19970 (WKI13_19970) - 4991836..4992693 (-) 858 WP_018275004.1 protein-glutamate O-methyltransferase CheR -
  WKI13_RS19975 (WKI13_19975) - 4992711..4994912 (-) 2202 WP_018275005.1 methyl-accepting chemotaxis protein -
  WKI13_RS19980 (WKI13_19980) - 4995072..4995611 (-) 540 WP_019603724.1 chemotaxis protein CheW -
  WKI13_RS19985 (WKI13_19985) pilH 4995656..4996018 (-) 363 WP_015818447.1 twitching motility response regulator PilH -
  WKI13_RS19990 (WKI13_19990) pilG 4996064..4996459 (-) 396 WP_015818072.1 twitching motility response regulator PilG Regulator
  WKI13_RS19995 (WKI13_19995) gshB 4996706..4997665 (+) 960 WP_018275007.1 glutathione synthase -
  WKI13_RS20000 (WKI13_20000) - 4997665..4998546 (+) 882 WP_018275008.1 energy transducer TonB -
  WKI13_RS20005 (WKI13_20005) - 4998630..4999208 (+) 579 WP_018275009.1 YqgE/AlgH family protein -
  WKI13_RS20010 (WKI13_20010) ruvX 4999201..4999641 (+) 441 WP_018275010.1 Holliday junction resolvase RuvX -
  WKI13_RS20015 (WKI13_20015) pilU 4999678..5000820 (-) 1143 WP_018275011.1 PilT/PilU family type 4a pilus ATPase Machinery gene

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14359.72 Da        Isoelectric Point: 7.8541

>NTDB_id=961673 WKI13_RS19990 WP_015818072.1 4996064..4996459(-) (pilG) [Teredinibacter turnerae strain T7902]
MDVNLEHLKVMVIDDSKTIRRTAETLLQKVGCTVVTATDGFDALAKIADTRPDIIFVDIMMPRLDGYQTCALIKNNSEFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKGELIGAIEAHVKVARAS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=961673 WKI13_RS19990 WP_015818072.1 4996064..4996459(-) (pilG) [Teredinibacter turnerae strain T7902]
ATGGACGTTAATCTAGAGCACTTGAAAGTGATGGTTATCGACGACAGTAAAACCATCCGGCGAACAGCAGAAACGCTGTT
GCAAAAAGTCGGTTGCACTGTGGTCACGGCAACGGATGGGTTTGATGCCCTCGCAAAAATTGCCGACACCCGTCCAGACA
TCATTTTTGTCGACATTATGATGCCCCGTCTCGACGGTTATCAAACCTGTGCACTGATCAAAAACAACAGCGAATTCAAA
TCGACACCCGTAATAATGCTTTCCAGTAAAGATGGTCTTTTCGATAAAGCGAAAGGCCGTATTGTGGGTTCAGACCAGTA
CCTGACAAAGCCGTTCAGCAAGGGTGAGCTGATCGGCGCGATCGAAGCCCACGTGAAAGTGGCTCGCGCGAGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

95.42

0.71
  vicR Streptococcus mutans UA159

41.525

90.076

0.374