NTDB

Overview

Name	ccpA	Type	Regulator
Locus tag	V8N34_RS02950	Genome accession	NZ_CP149804
Coordinates	609322..610326 (+)	Length	334 a.a.
NCBI ID	WP_002935813.1	Uniprot ID	A0A0K2E7G3
Organism	Streptococcus suis strain YA
Function	regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 604322..615326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V8N34_RS02925 (V8N34_02925)	-	605226..605705 (+)	480	WP_023369675.1	PTS sugar transporter subunit IIB	-
V8N34_RS02930 (V8N34_02930)	-	605753..606538 (+)	786	WP_024382208.1	PTS sugar transporter subunit IIC	-
V8N34_RS02935 (V8N34_02935)	-	606531..607349 (+)	819	WP_014636433.1	PTS system mannose/fructose/sorbose family transporter subunit IID	-
V8N34_RS02940 (V8N34_02940)	-	607362..607778 (+)	417	WP_024382209.1	PTS fructose transporter subunit IIA	-
V8N34_RS02945 (V8N34_02945)	-	608034..609113 (-)	1080	WP_024382210.1	Xaa-Pro peptidase family protein	-
V8N34_RS02950 (V8N34_02950)	ccpA	609322..610326 (+)	1005	WP_002935813.1	catabolite control protein A	Regulator
V8N34_RS02955 (V8N34_02955)	-	610747..612669 (-)	1923	WP_318825564.1	FctA domain-containing protein	-
V8N34_RS02960 (V8N34_02960)	-	612979..613977 (+)	999	WP_002935816.1	glycosyltransferase	-
V8N34_RS02965 (V8N34_02965)	-	613978..615291 (+)	1314	WP_014636842.1	glycosyltransferase family 4 protein	-

Sequence

Protein

Download Length: 334 a.a. Molecular weight: 36772.94 Da Isoelectric Point: 5.5173

                                >NTDB_id=961500 V8N34_RS02950 WP_002935813.1 609322..610326(+) (ccpA) [Streptococcus suis strain YA]

MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF

ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP

SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVFESKYKYEEGYALAERILNA

GATAAYVAEDEIAAGLLNGVSDMGVKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE

VVLNHGIKVRKSTK

Nucleotide

Download Length: 1005 bp

                                >NTDB_id=961500 V8N34_RS02950 WP_002935813.1 609322..610326(+) (ccpA) [Streptococcus suis strain YA]

ATGTTAAACACTGATGATACGGTTACGATTTACGATGTCGCCCGTGAAGCAGGTGTGTCCATGGCGACAGTATCGCGCGT

GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGATCGTTTGGATTATCGTCCAA

ATGCTGTTGCACGTGGATTGGCCAGCAAGAAGACTACCACTGTGGGGGTTGTGATTCCAAATATTGCTAACGCCTATTTT

GCAACCTTGGCCAAAGGTATCGATGATATTGCCGATATGTACAAATACAATATCGTCCTAGCAAACAGTGATGAAAATGA

TGAGAAAGAAATCAATGTGGTAAATACCCTATTCTCAAAACAGGTGGACGGAATCATTTTCATGGGCTATCATTTGACAG

ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACACCGATTGTTTTAGCTGGTACCGTGGACTTGGAGCACCAATTACCT

AGCGTCAATATTGACTATGCTGCCGCTAGTGTTGATGCAGTCAATCTATTAGCTAAGAACAACAAGAAAATTGCCTTTGT

ATCAGGACCGCTTGTAGATGACATCAACGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAATGGAATCG

AGTTTAACGAAGGATTGGTTTTTGAATCCAAGTATAAATACGAGGAGGGCTACGCTCTAGCAGAACGTATTTTGAATGCC

GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCTGGTCTATTGAATGGTGTCAGTGATATGGGCGTCAAGGT

TCCAGAAGACTTTGAAATCATTACAAGTGATGATTCCCTAGTGACCAAGTTTACCCGTCCAAACCTGACCTCTATCAATC

AGCCACTATATGATATTGGTGCAATTGCTATGCGCATGCTTACCAAAATCATGCACAAGGAAGAGTTGGAAAACCGTGAG

GTAGTTCTTAACCACGGAATCAAAGTACGGAAATCAACTAAGTGA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(176-333)

Bacterial regulatory proteins, lacI family (LacI)

(9-54)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0K2E7G3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
ccpA	Streptococcus pneumoniae D39	80.18	99.701	0.799
ccpA	Streptococcus gordonii str. Challis substr. CH1	79.58	99.701	0.793
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	59.215	99.102	0.587

Detailed information NTG0961500