Detailed information NTG0960382

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: WKI56_RS17410
• Genome accession: NZ_CP149650
• Coordinates: 3430846..3432009 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain MJ02
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3425846..3437009

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKI56_RS17380 (WKI56_17380)	-	3426111..3426530 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
WKI56_RS17385 (WKI56_17385)	comFC	3426604..3427293 (-)	690	WP_217425079.1	phosphoribosyltransferase family protein	Machinery gene
WKI56_RS17390 (WKI56_17390)	-	3427299..3427583 (-)	285	WP_017418816.1	competence protein ComFB	-
WKI56_RS17395 (WKI56_17395)	comFA	3427641..3429026 (-)	1386	WP_237586808.1	DEAD/DEAH box helicase	Machinery gene
WKI56_RS17400 (WKI56_17400)	-	3429134..3429982 (-)	849	WP_237586810.1	DegV family protein	-
WKI56_RS17405 (WKI56_17405)	degU	3430080..3430769 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
WKI56_RS17410 (WKI56_17410)	degS	3430846..3432009 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
WKI56_RS17415 (WKI56_17415)	-	3432232..3432879 (+)	648	WP_007614107.1	YigZ family protein	-
WKI56_RS17420 (WKI56_17420)	-	3432884..3434071 (+)	1188	WP_339078402.1	LCP family protein	-
WKI56_RS17425 (WKI56_17425)	-	3434171..3435247 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
WKI56_RS17430 (WKI56_17430)	-	3435379..3436575 (-)	1197	WP_071182023.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=960382 WKI56_RS17410 WP_007407484.1 3430846..3432009(-) (degS) [Bacillus velezensis strain MJ02]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=960382 WKI56_RS17410 WP_007407484.1 3430846..3432009(-) (degS) [Bacillus velezensis strain MJ02]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGAAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCAGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGCCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGATAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951