Detailed information NTG0960259

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: WKI54_RS04675
• Genome accession: NZ_CP149648
• Coordinates: 865984..867147 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain MJ04
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 860984..872147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKI54_RS04645 (WKI54_04645)	-	861249..861668 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
WKI54_RS04650 (WKI54_04650)	comFC	861742..862431 (-)	690	WP_217425079.1	phosphoribosyltransferase family protein	Machinery gene
WKI54_RS04655 (WKI54_04655)	-	862437..862721 (-)	285	WP_017418816.1	competence protein ComFB	-
WKI54_RS04660 (WKI54_04660)	comFA	862779..864164 (-)	1386	WP_339075853.1	DEAD/DEAH box helicase	Machinery gene
WKI54_RS04665 (WKI54_04665)	-	864272..865120 (-)	849	WP_003151387.1	DegV family protein	-
WKI54_RS04670 (WKI54_04670)	degU	865218..865907 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
WKI54_RS04675 (WKI54_04675)	degS	865984..867147 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
WKI54_RS04680 (WKI54_04680)	-	867370..868017 (+)	648	WP_339075854.1	YigZ family protein	-
WKI54_RS04685 (WKI54_04685)	-	868022..869215 (+)	1194	WP_128974134.1	LCP family protein	-
WKI54_RS04690 (WKI54_04690)	-	869315..870391 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
WKI54_RS04695 (WKI54_04695)	-	870523..871719 (-)	1197	WP_071182023.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=960259 WKI54_RS04675 WP_003151385.1 865984..867147(-) (degS) [Bacillus velezensis strain MJ04]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=960259 WKI54_RS04675 WP_003151385.1 865984..867147(-) (degS) [Bacillus velezensis strain MJ04]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTCCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948