Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   WKI52_RS00460 Genome accession   NZ_CP149646
Coordinates   82477..83463 (-) Length   328 a.a.
NCBI ID   WP_339073162.1    Uniprot ID   -
Organism   Bacillus velezensis strain MJ06     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 77477..88463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKI52_RS00425 (WKI52_00425) - 77734..78209 (+) 476 Protein_72 Na+/H+ antiporter subunit E -
  WKI52_RS00430 (WKI52_00430) - 78209..78493 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  WKI52_RS00435 (WKI52_00435) mnhG 78477..78851 (+) 375 WP_252052749.1 monovalent cation/H(+) antiporter subunit G -
  WKI52_RS00440 (WKI52_00440) - 78891..79274 (-) 384 WP_339073161.1 hotdog fold thioesterase -
  WKI52_RS00445 (WKI52_00445) comA 79296..79940 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  WKI52_RS00450 (WKI52_00450) comP 80021..82324 (-) 2304 WP_101562386.1 histidine kinase Regulator
  WKI52_RS00455 (WKI52_00455) comX 82344..82523 (-) 180 WP_318010531.1 competence pheromone ComX -
  WKI52_RS00460 (WKI52_00460) comQ 82477..83463 (-) 987 WP_339073162.1 class 1 isoprenoid biosynthesis enzyme Regulator
  WKI52_RS00465 (WKI52_00465) degQ 83594..83734 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  WKI52_RS00470 (WKI52_00470) - 84199..84540 (+) 342 WP_021495366.1 hypothetical protein -
  WKI52_RS00475 (WKI52_00475) - 84547..85770 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  WKI52_RS00480 (WKI52_00480) - 85900..87366 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  WKI52_RS00485 (WKI52_00485) - 87384..87935 (-) 552 WP_017419426.1 isochorismatase family cysteine hydrolase -
  WKI52_RS00490 (WKI52_00490) - 88032..88430 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37768.29 Da        Isoelectric Point: 5.2899

>NTDB_id=960175 WKI52_RS00460 WP_339073162.1 82477..83463(-) (comQ) [Bacillus velezensis strain MJ06]
MKTIIEQMCLDADQIKNRMKSIIEQNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LRIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELS

Nucleotide


Download         Length: 987 bp        

>NTDB_id=960175 WKI52_RS00460 WP_339073162.1 82477..83463(-) (comQ) [Bacillus velezensis strain MJ06]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCGACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCAGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAGAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
GTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATTCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGGAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(59-245)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.592

88.11

0.543