Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   WKI52_RS00445 Genome accession   NZ_CP149646
Coordinates   79296..79940 (-) Length   214 a.a.
NCBI ID   WP_014418762.1    Uniprot ID   A0A2Z4EIP2
Organism   Bacillus velezensis strain MJ06     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 74296..84940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKI52_RS00410 (WKI52_00410) - 75482..75913 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  WKI52_RS00415 (WKI52_00415) - 75913..76254 (+) 342 WP_022553706.1 Na(+)/H(+) antiporter subunit C -
  WKI52_RS00420 (WKI52_00420) - 76247..77728 (+) 1482 WP_017419418.1 Na+/H+ antiporter subunit D -
  WKI52_RS00425 (WKI52_00425) - 77734..78209 (+) 476 Protein_72 Na+/H+ antiporter subunit E -
  WKI52_RS00430 (WKI52_00430) - 78209..78493 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  WKI52_RS00435 (WKI52_00435) mnhG 78477..78851 (+) 375 WP_252052749.1 monovalent cation/H(+) antiporter subunit G -
  WKI52_RS00440 (WKI52_00440) - 78891..79274 (-) 384 WP_339073161.1 hotdog fold thioesterase -
  WKI52_RS00445 (WKI52_00445) comA 79296..79940 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  WKI52_RS00450 (WKI52_00450) comP 80021..82324 (-) 2304 WP_101562386.1 histidine kinase Regulator
  WKI52_RS00455 (WKI52_00455) comX 82344..82523 (-) 180 WP_318010531.1 competence pheromone ComX -
  WKI52_RS00460 (WKI52_00460) comQ 82477..83463 (-) 987 WP_339073162.1 class 1 isoprenoid biosynthesis enzyme Regulator
  WKI52_RS00465 (WKI52_00465) degQ 83594..83734 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  WKI52_RS00470 (WKI52_00470) - 84199..84540 (+) 342 WP_021495366.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24302.70 Da        Isoelectric Point: 4.9953

>NTDB_id=960173 WKI52_RS00445 WP_014418762.1 79296..79940(-) (comA) [Bacillus velezensis strain MJ06]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTQRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=960173 WKI52_RS00445 WP_014418762.1 79296..79940(-) (comA) [Bacillus velezensis strain MJ06]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGTAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACACAGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAATAAGCTGAATGTCGGCTCCCGCACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z4EIP2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

85.981

100

0.86