Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   WDR05_RS16285 Genome accession   NZ_CP149444
Coordinates   3116182..3118494 (-) Length   770 a.a.
NCBI ID   WP_069703660.1    Uniprot ID   -
Organism   Bacillus subtilis strain HC-9     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3111182..3123494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WDR05_RS16245 (WDR05_16225) mrpB 3111649..3112080 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  WDR05_RS16250 (WDR05_16230) mrpC 3112080..3112421 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  WDR05_RS16255 (WDR05_16235) mrpD 3112414..3113895 (+) 1482 WP_015714622.1 Na+/H+ antiporter subunit D -
  WDR05_RS16260 (WDR05_16240) mrpE 3113901..3114377 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  WDR05_RS16265 (WDR05_16245) mrpF 3114377..3114661 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  WDR05_RS16270 (WDR05_16250) mnhG 3114645..3115019 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  WDR05_RS16275 (WDR05_16255) yuxO 3115058..3115438 (-) 381 WP_015714624.1 hotdog fold thioesterase -
  WDR05_RS16280 (WDR05_16260) comA 3115457..3116101 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  WDR05_RS16285 (WDR05_16265) comP 3116182..3118494 (-) 2313 WP_069703660.1 histidine kinase Regulator
  WDR05_RS16290 (WDR05_16270) comX 3118510..3118731 (-) 222 WP_014480704.1 competence pheromone ComX -
  WDR05_RS16295 (WDR05_16275) - 3118733..3119596 (-) 864 WP_043858576.1 polyprenyl synthetase family protein -
  WDR05_RS16300 (WDR05_16280) degQ 3119781..3119921 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  WDR05_RS16305 (WDR05_16285) - 3120143..3120205 (+) 63 Protein_3145 hypothetical protein -
  WDR05_RS16310 (WDR05_16290) - 3120383..3120751 (+) 369 WP_017695529.1 hypothetical protein -
  WDR05_RS16315 (WDR05_16295) pdeH 3120727..3121956 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89571.75 Da        Isoelectric Point: 8.1625

>NTDB_id=959146 WDR05_RS16285 WP_069703660.1 3116182..3118494(-) (comP) [Bacillus subtilis strain HC-9]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSGVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFLEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILDVLNIDNACVYDNSKGEITLLSKNNFKDLTYTNHEQYVKNFTGDIGKI
KEFKQGFIIKIGERGDKSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=959146 WDR05_RS16285 WP_069703660.1 3116182..3118494(-) (comP) [Bacillus subtilis strain HC-9]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACTAATGTTT
TAGATTATACAGATGAATATTATTCAGGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATATTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGCGGGGCAAGAAGAGGTGAAGAGATAAGCACTTACCTGCTTGTTCTTACTTTAGTCAGCTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTGGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTGCTTATGTTTGCCGTTTTTTACTTTAAAGAGATTATTGACTTTCGTTTCAAGTTAAAAAGATTTACTGAAAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAATTAATAAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAGAATACAATCTTAGATGTATTAAATATAGATAATGCTTGTGTGTATGATAATTCAAAAGGAGAAATTACTCTCCTTA
GCAAGAATAACTTTAAAGATCTCACTTATACAAATCATGAGCAATATGTGAAAAATTTTACTGGTGATATCGGCAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAAATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAATTAACAAGAGATGAAATTGCATGGCTCCAAACATTAGCGTTTTATACAAATGTTTCATTGGAAAACG
TGATGAAAATAGAGGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCCGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTGG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACAAGGGAGACGTGTCATGAGTTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.437

99.87

0.564