Detailed information NTG0095879

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: AABA07_RS09005
• Genome accession: NZ_AP028608
• Coordinates: 1767308..1768219 (-)
• Length: 303 a.a.
• NCBI ID: WP_000904856.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep3
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1762308..1773219

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA07_RS08980 (TKY120829_17660)	rsmA	1762638..1763510 (-)	873	WP_001216865.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
AABA07_RS08985 (TKY120829_17670)	-	1763641..1763949 (-)	309	WP_000333257.1	hypothetical protein	-
AABA07_RS08990 (TKY120829_17680)	-	1763942..1764583 (-)	642	WP_000565533.1	ABC transporter ATP-binding protein	-
AABA07_RS08995 (TKY120829_17690)	-	1764585..1766615 (-)	2031	WP_000825279.1	bacteriocin-associated integral membrane family protein	-
AABA07_RS09000 (TKY120829_17700)	-	1766692..1766988 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
AABA07_RS09005 (TKY120829_17710)	comR	1767308..1768219 (-)	912	WP_000904856.1	XRE family transcriptional regulator	Regulator
AABA07_RS09010 (TKY120829_17720)	rnmV	1768291..1768851 (-)	561	WP_000660011.1	ribonuclease M5	-
AABA07_RS09015 (TKY120829_17730)	-	1768851..1769624 (-)	774	WP_000575634.1	TatD family hydrolase	-
AABA07_RS09020	-	1769929..1770827 (-)	899	Protein_1763	DUF1542 domain-containing protein	-
AABA07_RS09025 (TKY120829_17760)	rpmH	1771111..1771245 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
AABA07_RS09030 (TKY120829_17770)	-	1771390..1772604 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
AABA07_RS09035	-	1772760..1773053 (-)	294	WP_000977365.1	hypothetical protein	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 35479.78 Da
• Isoelectric Point: 4.5324

>NTDB_id=95879 AABA07_RS09005 WP_000904856.1 1767308..1768219(-) (comR) [Streptococcus pneumoniae strain Sep3]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIEDLFYEQLPNEEKVWFEATRATIDVIRSGRPEYGETVLDDYFKTIYDKELFLINELEV
INLYFAIVLTKIKQGQNQIEEINRIHSFLVRLTNHVELIAPEYLFALSNTLFSGLACLDNLSSYDSLGAYIFSLNHIMEK
TQDFQKKPIILMLEWKLSLIINNDYVSAEQFYQKSKLFADIIENSYLVTMLEKQWQEDLKKYL

Nucleotide

• Length: 912 bp

>NTDB_id=95879 AABA07_RS09005 WP_000904856.1 1767308..1768219(-) (comR) [Streptococcus pneumoniae strain Sep3]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATAGAGGATTTATTTTA
TGAGCAACTTCCTAATGAGGAAAAAGTATGGTTTGAAGCTACTAGAGCAACGATAGATGTTATTCGAAGTGGACGACCAG
AATACGGGGAAACCGTACTGGACGATTATTTTAAAACAATTTATGATAAGGAATTGTTTTTGATAAATGAATTAGAAGTT
ATCAACTTATATTTTGCTATAGTGCTTACAAAGATAAAACAAGGTCAAAATCAGATTGAAGAAATTAACAGAATTCATTC
GTTTTTAGTTCGTTTGACAAATCATGTAGAATTAATTGCACCAGAATATCTGTTTGCTTTAAGTAACACTTTGTTTTCGG
GTCTAGCCTGTTTGGATAACTTGTCATCTTATGATTCACTAGGAGCTTATATCTTTAGCCTTAATCATATAATGGAAAAA
ACACAAGATTTCCAGAAGAAACCAATTATATTAATGTTGGAGTGGAAATTATCTCTAATAATAAACAATGATTATGTTTC
TGCCGAACAGTTCTATCAGAAATCGAAGCTATTTGCTGATATAATAGAAAATTCTTATTTAGTTACTATGTTAGAAAAAC
AATGGCAAGAAGATTTAAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	39.189	97.69	0.383
comR	Streptococcus pyogenes MGAS8232	37.5	100	0.376
comR	Streptococcus suis P1/7	37.627	97.36	0.366
comR	Streptococcus suis 05ZYH33	37.627	97.36	0.366