Detailed information NTG0958640

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACI3L8_RS02685
• Genome accession: NZ_CP173391
• Coordinates: 619208..620488 (-)
• Length: 426 a.a.
• NCBI ID: WP_005430932.1
• Uniprot ID: A7MV82
• Organism: Vibrio campbellii strain LB3
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 614208..625488

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3L8_RS02675 (ACI3L8_02675)	-	616262..616534 (-)	273	WP_005430934.1	HU family DNA-binding protein	-
ACI3L8_RS02680 (ACI3L8_02680)	lon	616726..619077 (-)	2352	WP_005529911.1	endopeptidase La	-
ACI3L8_RS02685 (ACI3L8_02685)	clpX	619208..620488 (-)	1281	WP_005430932.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
ACI3L8_RS02690 (ACI3L8_02690)	clpP	620560..621186 (-)	627	WP_005430931.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ACI3L8_RS02695 (ACI3L8_02695)	tig	621293..622597 (-)	1305	WP_045370540.1	trigger factor	-
ACI3L8_RS02700 (ACI3L8_02700)	-	623122..624927 (+)	1806	WP_404971849.1	ATP-binding protein	-

Sequence

Protein

• Length: 426 a.a.
• Molecular weight: 46694.22 Da
• Isoelectric Point: 4.5616

>NTDB_id=958640 ACI3L8_RS02685 WP_005430932.1 619208..620488(-) (clpX) [Vibrio campbellii strain LB3]
MTDKSKESGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKKESEALPTPKQIREHLDDYVI
GQDYAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDV
ENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
DTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNETKTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELD
EEALIQILCEPKNALTKQYAALFELEDAELEFREDALRAIAKKAMERKTGARGLRSILESVLLETMYELPSATDVSKVVI
DESVINGESEPLLIYSNADNQAAGAE

Nucleotide

• Length: 1281 bp

>NTDB_id=958640 ACI3L8_RS02685 WP_005430932.1 619208..620488(-) (clpX) [Vibrio campbellii strain LB3]
ATGACAGATAAAAGCAAAGAAAGTGGCAGCGGCAAATTGCTGTACTGCTCTTTCTGTGGCAAAAGTCAGCACGAAGTTCG
CAAGCTAATCGCAGGTCCGTCAGTTTACATTTGCGACGAGTGTGTCGACTTATGTAACGATATCATTCGCGAAGAAATCA
AGGATGTTCTCCCTAAGAAAGAATCTGAAGCGTTACCAACGCCAAAACAGATCCGTGAACACCTTGATGACTATGTGATC
GGACAAGATTACGCGAAAAAAGTGCTCGCAGTTGCGGTATATAACCACTACAAGCGTTTACGCAATGGTGATACAACGAG
CGAAGGTGTGGAACTTGGTAAAAGTAACATCCTTCTAATTGGTCCTACTGGTAGTGGTAAAACACTGCTTGCTGAGACGC
TAGCTCGATTCCTGGATGTGCCATTTACAATGGCTGACGCTACCACACTAACCGAAGCAGGTTACGTTGGTGAAGACGTT
GAAAACATCATCCAGAAGCTTCTGCAAAAATGTGATTACGATGTAGCGAAGGCTGAACGCGGCATTGTATACATTGACGA
AATTGACAAAATTTCTCGTAAAGCTGAAAACCCATCAATTACGCGCGACGTATCTGGTGAAGGTGTTCAGCAGGCGCTAC
TAAAACTTATCGAAGGTACGGTTGCATCGGTTCCGCCACAAGGTGGTCGTAAGCATCCGCAGCAAGAATTCCTACAAGTG
GACACGTCTAAGATCCTGTTCATCTGTGGTGGTGCATTTGCTGGCCTAGATAAAGTGATTGAACAGCGTGTAGCGACAGG
CACAGGTATTGGTTTTGGCGCAGAAGTGCGCTCTAAGAACGAAACCAAAACAGTCGGTGAACTATTTACTCAGGTAGAGC
CTGAAGATCTAGTGAAATACGGTCTGATCCCTGAGTTCATCGGTCGTCTACCAGTAACAACAACACTGACTGAGCTTGAT
GAAGAAGCGTTAATTCAGATCCTATGTGAACCGAAGAACGCACTGACCAAGCAATACGCAGCATTGTTCGAGCTAGAAGA
CGCTGAACTTGAGTTCCGTGAAGACGCGCTACGTGCTATCGCTAAAAAAGCGATGGAGCGTAAAACGGGTGCTCGTGGTC
TACGCTCAATCTTAGAAAGCGTTCTGCTAGAAACCATGTATGAACTGCCATCAGCGACGGACGTAAGTAAAGTCGTGATT
GATGAATCAGTGATTAACGGTGAATCAGAACCATTGCTCATTTACAGCAACGCCGACAATCAGGCCGCTGGAGCAGAATA
A

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (14-51)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (319-396)

3D structure

• AlphaFold DB: A7MV82

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	58.853	94.131	0.554
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.321	95.07	0.516