Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   ACIV1F_RS05215 Genome accession   NZ_CP173176
Coordinates   1041037..1042026 (+) Length   329 a.a.
NCBI ID   WP_024937153.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA0413Rev     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1036037..1047026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIV1F_RS05190 (ACIV1F_001038) - 1036783..1037274 (+) 492 WP_000383814.1 DUF948 domain-containing protein -
  ACIV1F_RS05195 (ACIV1F_001039) - 1037348..1038706 (+) 1359 WP_024937152.1 hypothetical protein -
  ACIV1F_RS05200 (ACIV1F_001040) - 1038841..1038945 (+) 105 WP_001791758.1 hypothetical protein -
  ACIV1F_RS05205 (ACIV1F_001041) - 1039406..1040497 (+) 1092 WP_000066378.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  ACIV1F_RS05210 (ACIV1F_001042) - 1040851..1040964 (+) 114 WP_001788994.1 hypothetical protein -
  ACIV1F_RS05215 (ACIV1F_001043) ccpA 1041037..1042026 (+) 990 WP_024937153.1 catabolite control protein A Regulator
  ACIV1F_RS05220 (ACIV1F_001044) - 1042124..1043293 (-) 1170 WP_001184005.1 acetoin utilization protein AcuC -
  ACIV1F_RS05225 (ACIV1F_001045) - 1043318..1043950 (-) 633 WP_024937154.1 hypothetical protein -
  ACIV1F_RS05230 (ACIV1F_001046) acsA 1044119..1045825 (+) 1707 WP_000862083.1 acetate--CoA ligase -

Sequence

Protein


Download         Length: 329 a.a.        Molecular weight: 36090.26 Da        Isoelectric Point: 5.5054

>NTDB_id=956913 ACIV1F_RS05215 WP_024937153.1 1041037..1042026(+) (ccpA) [Staphylococcus aureus strain SA0413Rev]
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGTKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Nucleotide


Download         Length: 990 bp        

>NTDB_id=956913 ACIV1F_RS05215 WP_024937153.1 1041037..1042026(+) (ccpA) [Staphylococcus aureus strain SA0413Rev]
ATGACAGTTACTATATATGATGTAGCAAGAGAAGCGCGTGTCTCTATGGCCACAGTGTCGCGTGTTGTTAATGGGAACCA
AAATGTTAAAGCAGAAACTAAAAATAAAGTTAACGAAGTCATTAAGCGTTTGAATTATCGTCCAAATGCTGTTGCTAGAG
GTTTAGCTAGTAAAAAGACAACAACAGTAGGTGTGATCATTCCAGATATATCTAATATCTATTATTCACAACTTGCTCGT
GGACTTGAAGATATTGCAACAATGTATAAATATCACTCAATTATTTCAAATTCAGATAACGATCCTGAAAAGGAAAAAGA
AATTTTTAATAACTTATTAAGTAAACAGGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTAGTATCAGGAACAAATGGTAAGGATGCACATATAGCATCAGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAATTAATTGAAAAAGGCACTAAATCATTTGCTTTAGTAGGTGGAGAACA
TTCTAAAAAAGCTCAAGAAGATGTTTTAGAAGGTTTAACTGAAGTGTTAAATAAAAATGGCCTTCAATTAGGTGATACAT
TGAATTGTTCTGGTGCTGAAAGTTATAAAGAAGGCGTAAAAGCTTTTGCCAAAATGAAAGGCAATTTGCCAGATGCCATT
TTATGTATCAGCGACGAAGAAGCAATTGGTATTATGCATAGTGCAATGGATGCTGGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGATTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGGATGCGCTTATTAACAAAATATATGAACGATGAAAAGATAGAAGAACCAAATGTAGTTTTACCTCAC
AGAATTGAATACCGAGGAACTACAAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, lacI family (LacI)

(4-49)

Periplasmic binding protein-like domain (Peripla_BP_3)

(171-328)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

47.879

100

0.48
  ccpA Streptococcus gordonii str. Challis substr. CH1

47.112

100

0.471
  ccpA Streptococcus pneumoniae D39

46.505

100

0.465