Detailed information NTG0095640

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: AAA996_RS09415
• Genome accession: NZ_AP028606
• Coordinates: 1838337..1839248 (-)
• Length: 303 a.a.
• NCBI ID: WP_000904856.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep1
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1833337..1844248

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA996_RS09390 (TKY121773_18410)	rsmA	1833667..1834539 (-)	873	WP_317640184.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
AAA996_RS09395 (TKY121773_18420)	-	1834670..1834978 (-)	309	WP_000333257.1	hypothetical protein	-
AAA996_RS09400 (TKY121773_18430)	-	1834971..1835612 (-)	642	WP_000565533.1	ABC transporter ATP-binding protein	-
AAA996_RS09405 (TKY121773_18440)	-	1835614..1837644 (-)	2031	WP_000825279.1	bacteriocin-associated integral membrane family protein	-
AAA996_RS09410 (TKY121773_18450)	-	1837721..1838017 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
AAA996_RS09415 (TKY121773_18460)	comR	1838337..1839248 (-)	912	WP_000904856.1	XRE family transcriptional regulator	Regulator
AAA996_RS09420 (TKY121773_18470)	rnmV	1839320..1839880 (-)	561	WP_000660011.1	ribonuclease M5	-
AAA996_RS09425 (TKY121773_18480)	-	1839880..1840653 (-)	774	WP_317640193.1	TatD family hydrolase	-
AAA996_RS09430 (TKY121773_18490)	-	1840958..1841857 (-)	900	WP_000226472.1	DUF1542 domain-containing protein	-
AAA996_RS09435 (TKY121773_18500)	rpmH	1842141..1842275 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
AAA996_RS09440 (TKY121773_18510)	-	1842420..1843634 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
AAA996_RS09445	-	1843790..1844083 (-)	294	WP_000977365.1	hypothetical protein	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 35479.78 Da
• Isoelectric Point: 4.5324

>NTDB_id=95640 AAA996_RS09415 WP_000904856.1 1838337..1839248(-) (comR) [Streptococcus pneumoniae strain Sep1]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIEDLFYEQLPNEEKVWFEATRATIDVIRSGRPEYGETVLDDYFKTIYDKELFLINELEV
INLYFAIVLTKIKQGQNQIEEINRIHSFLVRLTNHVELIAPEYLFALSNTLFSGLACLDNLSSYDSLGAYIFSLNHIMEK
TQDFQKKPIILMLEWKLSLIINNDYVSAEQFYQKSKLFADIIENSYLVTMLEKQWQEDLKKYL

Nucleotide

• Length: 912 bp

>NTDB_id=95640 AAA996_RS09415 WP_000904856.1 1838337..1839248(-) (comR) [Streptococcus pneumoniae strain Sep1]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATAGAGGATTTATTTTA
TGAGCAACTTCCTAATGAGGAAAAAGTATGGTTTGAAGCTACTAGAGCAACGATAGATGTTATTCGAAGTGGACGACCAG
AATACGGGGAAACCGTACTGGACGATTATTTTAAAACAATTTATGATAAGGAATTGTTTTTGATAAATGAATTAGAAGTT
ATCAACTTATATTTTGCTATAGTGCTTACAAAGATAAAACAAGGTCAAAATCAGATTGAAGAAATTAACAGAATTCATTC
GTTTTTAGTTCGTTTGACAAATCATGTAGAATTAATTGCACCAGAATATCTGTTTGCTTTAAGTAACACTTTGTTTTCGG
GTCTAGCCTGTTTGGATAACTTGTCATCTTATGATTCACTAGGAGCTTATATCTTTAGCCTTAATCATATAATGGAAAAA
ACACAAGATTTCCAGAAGAAACCAATTATATTAATGTTGGAGTGGAAATTATCTCTAATAATAAACAATGATTATGTTTC
TGCCGAACAGTTCTATCAGAAATCGAAGCTATTTGCTGATATAATAGAAAATTCTTATTTAGTTACTATGTTAGAAAAAC
AATGGCAAGAAGATTTAAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	39.189	97.69	0.383
comR	Streptococcus pyogenes MGAS8232	37.5	100	0.376
comR	Streptococcus suis P1/7	37.627	97.36	0.366
comR	Streptococcus suis 05ZYH33	37.627	97.36	0.366