Detailed information NTG0953499

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: Q3A86_RS11755
• Genome accession: NZ_CP172414
• Coordinates: 2829260..2830546 (-)
• Length: 428 a.a.
• NCBI ID: WP_224306860.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBUA17
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2824260..2835546

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q3A86_RS11745 (Q3A86_11745)	-	2825453..2828077 (-)	2625	WP_194277715.1	valine--tRNA ligase	-
Q3A86_RS11750 (Q3A86_11750)	-	2828214..2829155 (+)	942	WP_399138130.1	hypothetical protein	-
Q3A86_RS11755 (Q3A86_11755)	clpX	2829260..2830546 (-)	1287	WP_224306860.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
Q3A86_RS11760 (Q3A86_11760)	clpP	2830738..2831451 (-)	714	WP_031040348.1	ATP-dependent Clp protease proteolytic subunit	Regulator
Q3A86_RS11765 (Q3A86_11765)	clpP	2831502..2832107 (-)	606	WP_031040345.1	ATP-dependent Clp protease proteolytic subunit	Regulator
Q3A86_RS11770 (Q3A86_11770)	tig	2832477..2833904 (-)	1428	WP_031040342.1	trigger factor	-
Q3A86_RS11785 (Q3A86_11785)	-	2834809..2835003 (-)	195	WP_031040337.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46810.56 Da
• Isoelectric Point: 4.7389

>NTDB_id=953499 Q3A86_RS11755 WP_224306860.1 2829260..2830546(-) (clpX) [Streptomyces sp. NBUA17]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEELPKPREIYEFLESYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGAQIRSKREIESKDQFEQVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAILEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=953499 Q3A86_RS11755 WP_224306860.1 2829260..2830546(-) (clpX) [Streptomyces sp. NBUA17]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGAGCA
GCGAGGTCCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTGGAGAGCTACGTGGTCGGCCAGGAGGCG
GCCAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCCCAAGGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCCCAGA
CCCTGGCGCGCATGCTGAACGTGCCGTTCGCCATCGCCGACGCCACCGCGCTCACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGCAAGAGCGAGAACCCCTCGATCACCCGCGACGTCTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCGGTGCCCCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGATCATCGAGGGCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGCAGATCCGCTCCAAGCGGGAGATCGAGTCCAAGGACCAGTTCGAGCAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCATCACCTCCGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCACTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCCTGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCCTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTCTCCAACGTCAACCCCACGCTGATCCCCCGGGATTCGCGCGGCCGGGGCTCGGGCGAGCAGAAGAC
GGCCTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.027	94.159	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521