Detailed information NTG0953469

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACHZDB_RS15035
• Genome accession: NZ_CP172405
• Coordinates: 3279782..3281062 (+)
• Length: 426 a.a.
• NCBI ID: WP_005430932.1
• Uniprot ID: A7MV82
• Organism: Vibrio campbellii strain LB503
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3274782..3286062

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHZDB_RS15020 (ACHZDB_15020)	-	3275343..3277148 (-)	1806	WP_399424403.1	ATP-binding protein	-
ACHZDB_RS15025 (ACHZDB_15025)	tig	3277673..3278977 (+)	1305	WP_045370540.1	trigger factor	-
ACHZDB_RS15030 (ACHZDB_15030)	clpP	3279084..3279710 (+)	627	WP_005430931.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ACHZDB_RS15035 (ACHZDB_15035)	clpX	3279782..3281062 (+)	1281	WP_005430932.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
ACHZDB_RS15040 (ACHZDB_15040)	lon	3281193..3283544 (+)	2352	WP_005529911.1	endopeptidase La	-
ACHZDB_RS15045 (ACHZDB_15045)	-	3283736..3284008 (+)	273	WP_005430934.1	HU family DNA-binding protein	-

Sequence

Protein

• Length: 426 a.a.
• Molecular weight: 46694.22 Da
• Isoelectric Point: 4.5616

>NTDB_id=953469 ACHZDB_RS15035 WP_005430932.1 3279782..3281062(+) (clpX) [Vibrio campbellii strain LB503]
MTDKSKESGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKKESEALPTPKQIREHLDDYVI
GQDYAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDV
ENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
DTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNETKTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELD
EEALIQILCEPKNALTKQYAALFELEDAELEFREDALRAIAKKAMERKTGARGLRSILESVLLETMYELPSATDVSKVVI
DESVINGESEPLLIYSNADNQAAGAE

Nucleotide

• Length: 1281 bp

>NTDB_id=953469 ACHZDB_RS15035 WP_005430932.1 3279782..3281062(+) (clpX) [Vibrio campbellii strain LB503]
ATGACAGATAAAAGCAAAGAAAGTGGCAGCGGCAAATTGCTGTACTGCTCTTTCTGTGGCAAAAGTCAGCACGAAGTTCG
CAAGCTAATCGCAGGTCCGTCAGTTTACATTTGCGACGAGTGTGTCGACTTATGTAACGATATCATTCGCGAAGAAATCA
AGGATGTTCTCCCTAAGAAAGAATCTGAAGCGTTACCAACGCCAAAACAGATCCGTGAACACCTTGATGACTATGTGATC
GGACAAGATTACGCGAAAAAAGTGCTCGCAGTTGCGGTATATAACCACTACAAGCGTTTACGCAATGGTGATACAACGAG
CGAAGGTGTGGAACTTGGTAAAAGTAACATCCTTCTAATTGGTCCTACTGGTAGTGGTAAAACACTGCTTGCTGAGACGC
TAGCTCGATTCCTGGATGTGCCATTTACAATGGCTGACGCTACCACACTAACCGAAGCAGGTTACGTTGGTGAAGACGTT
GAAAACATCATCCAGAAGCTTCTGCAAAAATGTGATTACGATGTAGCGAAGGCTGAACGCGGCATTGTATACATTGACGA
AATTGACAAAATTTCTCGTAAAGCTGAAAACCCATCAATTACGCGCGACGTATCTGGTGAAGGTGTTCAGCAGGCGCTAC
TAAAACTTATCGAAGGTACGGTTGCATCGGTTCCGCCACAAGGTGGTCGTAAGCATCCGCAGCAAGAATTCCTACAAGTG
GACACGTCTAAGATCCTGTTCATCTGTGGTGGTGCATTTGCTGGCCTAGATAAAGTGATTGAACAGCGTGTAGCGACAGG
CACAGGTATTGGTTTTGGCGCAGAAGTGCGCTCTAAGAACGAAACCAAAACAGTCGGTGAACTATTTACTCAGGTAGAAC
CTGAAGATCTAGTGAAATACGGTCTGATCCCTGAGTTCATCGGTCGTCTACCAGTAACAACAACACTGACTGAGCTTGAT
GAAGAAGCGCTAATTCAGATCCTATGTGAGCCGAAGAACGCACTGACCAAGCAATACGCAGCTTTGTTCGAACTAGAAGA
CGCTGAACTTGAGTTCCGTGAAGACGCGCTACGTGCTATCGCTAAGAAAGCGATGGAGCGTAAAACGGGTGCTCGTGGTC
TACGCTCAATCTTAGAAAGTGTTCTGCTAGAAACCATGTATGAACTGCCATCAGCGACGGACGTAAGTAAAGTCGTGATT
GATGAATCAGTGATTAACGGTGAATCAGAACCATTGCTCATTTACAGCAACGCCGACAATCAGGCCGCTGGAGCAGAATA
A

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (14-51)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (319-396)

3D structure

• AlphaFold DB: A7MV82

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	58.853	94.131	0.554
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.321	95.07	0.516