Detailed information NTG0095234

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: QML87_RS09220
• Genome accession: NZ_AP025936
• Coordinates: 1809376..1809837 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250539.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700617
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1804376..1814837

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QML87_RS09185 (PC0607_17950)	-	1804681..1805505 (-)	825	WP_000727909.1	membrane protein insertase YidC	-
QML87_RS09190 (PC0607_17960)	rnpA	1805480..1805851 (-)	372	WP_000739246.1	ribonuclease P protein component	-
QML87_RS09195	-	1805868..1805999 (-)	132	WP_000768904.1	hypothetical protein	-
QML87_RS09200 (PC0607_17970)	-	1806000..1807190 (-)	1191	WP_000167769.1	acetate/propionate family kinase	-
QML87_RS09205 (PC0607_17980)	comYH	1807241..1808194 (-)	954	WP_000345080.1	class I SAM-dependent methyltransferase	Machinery gene
QML87_RS09210	-	1808255..1808849 (-)	595	Protein_1797	methyltransferase domain-containing protein	-
QML87_RS09215 (PC0607_18010)	comGG/cglG	1808952..1809398 (-)	447	WP_001842224.1	competence type IV pilus minor pilin ComGG	Machinery gene
QML87_RS09220	comGF/cglF	1809376..1809837 (-)	462	WP_000250539.1	competence type IV pilus minor pilin ComGF	Machinery gene
QML87_RS09225 (PC0607_18030)	comGE/cglE	1809800..1810102 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
QML87_RS09230 (PC0607_18040)	comGD/cglD	1810065..1810469 (-)	405	WP_000588030.1	competence type IV pilus minor pilin ComGD	Machinery gene
QML87_RS09235 (PC0607_18050)	comGC/cglC	1810462..1810788 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
QML87_RS09240 (PC0607_18060)	comGB/cglB	1810790..1811806 (-)	1017	WP_078102766.1	competence type IV pilus assembly protein ComGB	Machinery gene
QML87_RS09245 (PC0607_18070)	comGA/cglA/cilD	1811754..1812695 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
QML87_RS09250 (PC0607_18080)	-	1812771..1813136 (-)	366	WP_000286415.1	DUF1033 family protein	-
QML87_RS09255 (PC0607_18090)	-	1813287..1814345 (-)	1059	WP_000649470.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17851.34 Da
• Isoelectric Point: 6.4832

>NTDB_id=95234 QML87_RS09220 WP_000250539.1 1809376..1809837(-) (comGF/cglF) [Streptococcus pneumoniae strain PZ900700617]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQTMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=95234 QML87_RS09220 WP_000250539.1 1809376..1809837(-) (comGF/cglF) [Streptococcus pneumoniae strain PZ900700617]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAACTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae D39	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae R6	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae TIGR4	94.118	100	0.941
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus mitis NCTC 12261	91.503	100	0.915