Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   WHL51_RS15675 Genome accession   NZ_CP148102
Coordinates   3043364..3045688 (-) Length   774 a.a.
NCBI ID   WP_003220714.1    Uniprot ID   -
Organism   Bacillus spizizenii str. W23     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3038364..3050688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL51_RS15635 - 3038834..3039265 (+) 432 WP_003220732.1 Na(+)/H(+) antiporter subunit B -
  WHL51_RS15640 - 3039265..3039606 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  WHL51_RS15645 - 3039599..3041080 (+) 1482 WP_003220728.1 Na+/H+ antiporter subunit D -
  WHL51_RS15650 - 3041086..3041562 (+) 477 WP_003220727.1 Na+/H+ antiporter subunit E -
  WHL51_RS15655 - 3041562..3041846 (+) 285 WP_003220724.1 Na(+)/H(+) antiporter subunit F1 -
  WHL51_RS15660 mnhG 3041830..3042204 (+) 375 WP_003220721.1 monovalent cation/H(+) antiporter subunit G -
  WHL51_RS15665 - 3042243..3042623 (-) 381 WP_003220719.1 hotdog fold thioesterase -
  WHL51_RS15670 comA 3042639..3043283 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  WHL51_RS15675 comP 3043364..3045688 (-) 2325 WP_003220714.1 histidine kinase Regulator
  WHL51_RS15680 comX 3045696..3045860 (-) 165 WP_003220712.1 competence pheromone ComX -
  WHL51_RS15685 - 3045873..3046733 (-) 861 WP_003220710.1 polyprenyl synthetase family protein -
  WHL51_RS15690 degQ 3046919..3047059 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  WHL51_RS15695 - 3047291..3047407 (+) 117 WP_136975871.1 hypothetical protein -
  WHL51_RS15700 - 3047522..3047890 (+) 369 WP_003220698.1 hypothetical protein -
  WHL51_RS15705 pdeH 3047866..3049095 (-) 1230 WP_003220696.1 cyclic di-GMP phosphodiesterase -

Sequence

Protein


Download         Length: 774 a.a.        Molecular weight: 89526.81 Da        Isoelectric Point: 6.9518

>NTDB_id=950454 WHL51_RS15675 WP_003220714.1 3043364..3045688(-) (comP) [Bacillus spizizenii str. W23]
MKSWHNKISIFLIIISLVYVAYLTYISSNKLLVGATLEKNKANEVVITNIEEFSVAYDSGIEKGDIVKSIDNHEVNSSFN
VKKKINHASSIVVERDGKDLEVKFDVMNDSNFSTFLIPLIFYIVCLFCCFFILKINESKKLLSALILVIFLLSASLAYLS
AGGSAKGDLLSRCIMVFTLTTVLLNYLLFLHQYFKELGTILFSKKVFVLYFISIFNVAFELLRENLFFKDYVPKLNLLTF
LLIFIIVVVYFGVILYKNKDTEQAHVLKALTIINIISFLPFLCLYLIPYVFLNIQYVSSFLTASFMLLIPFSLVYQFMTN
KIYNVDFILSRLKYYGFLALTPTIILIVTFELLRRPEGDFYYIRLAVLIYIIMVAVFYYKEVLDFKFRLKRVSEKFNYQD
SIYKFTQLIRDSTSLSQVFEELKNTILEVSLVSRAYVYEVSADGSIKLYDNEAVNSFEKVYQKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLARDLHDSVLQDLISLKRQCELFLADFKKDDNPCQEEVQDKLVQMNEQMSDVISMTRETCHELRP
QLLYDLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQASDVLIMLISIQNKIVLH
YEDDGVGFDQEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2325 bp        

>NTDB_id=950454 WHL51_RS15675 WP_003220714.1 3043364..3045688(-) (comP) [Bacillus spizizenii str. W23]
ATGAAATCTTGGCACAATAAAATTTCAATTTTCTTGATCATAATTAGTTTAGTCTATGTAGCTTATTTGACGTATATTAG
CTCTAACAAACTTCTAGTTGGAGCTACTCTTGAAAAAAATAAGGCTAACGAAGTCGTAATCACAAATATTGAAGAATTTT
CTGTTGCTTATGATTCTGGCATAGAAAAAGGCGATATCGTAAAAAGCATAGATAATCATGAAGTAAACAGTTCATTCAAT
GTTAAAAAGAAGATCAATCATGCCAGTTCAATAGTTGTTGAGCGAGATGGAAAAGATTTAGAAGTTAAGTTTGATGTAAT
GAATGATAGCAATTTTTCAACTTTTCTCATACCGTTAATTTTTTATATAGTGTGTCTATTTTGCTGTTTTTTCATACTAA
AGATAAATGAGTCAAAAAAATTGCTATCTGCTTTAATATTAGTCATTTTTCTTTTATCTGCATCTTTAGCATACTTAAGT
GCAGGAGGATCTGCTAAGGGTGATTTGTTAAGCAGATGTATTATGGTTTTTACTTTAACAACTGTGCTGCTTAACTACCT
TCTTTTTTTACATCAATATTTTAAAGAACTAGGCACTATATTATTCAGTAAGAAAGTTTTTGTTTTATATTTTATTTCTA
TATTTAATGTAGCTTTCGAATTATTGCGTGAAAATCTGTTTTTTAAAGACTATGTACCGAAATTAAACCTACTTACCTTT
TTGCTTATATTTATAATAGTAGTAGTATACTTTGGCGTTATTTTATACAAAAATAAAGATACTGAACAAGCGCATGTGTT
AAAAGCACTTACCATCATTAATATTATCTCTTTTTTGCCATTTTTGTGTTTATATTTGATTCCGTATGTGTTCTTAAACA
TACAGTATGTTTCTTCTTTTTTAACTGCTTCCTTTATGTTGCTTATACCTTTTTCTTTGGTTTATCAATTTATGACAAAT
AAAATTTATAATGTTGATTTTATTTTAAGTAGATTAAAGTATTATGGTTTTTTAGCATTGACACCAACAATTATTTTAAT
TGTTACATTTGAGTTATTGAGAAGGCCAGAGGGAGATTTTTATTATATTAGGCTTGCGGTTCTGATATATATTATTATGG
TGGCTGTTTTTTATTATAAAGAAGTACTTGATTTCAAATTTAGATTAAAAAGGGTCTCGGAAAAATTTAATTATCAAGAC
AGTATATATAAATTTACGCAGCTGATTAGAGACTCAACTTCCCTGTCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTCTCTCTTGTTAGCCGAGCATATGTATATGAAGTGTCAGCTGACGGAAGTATTAAACTATATGATAATGAGGCCG
TAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTCACATCCGAAATAGGGAAAATCGTTGAATTTAATAAA
GGCTTTGTCATGAAGATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCCCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAATGTATCGATCGAAAATGTCATGAAAATCGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCAGTATGGCTCAAAAAACTCATGTACACGATCGAA
GAAAAACAACGTTCCGATCTCGCCCGCGATCTCCACGATTCCGTTCTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGA
TTTAATTTCATTAAAACGACAGTGTGAGCTGTTTTTGGCTGATTTTAAGAAGGATGATAATCCGTGCCAGGAAGAGGTAC
AGGACAAGCTTGTACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCG
CAGCTTCTGTATGATCTTGGGCTGGTGAAGGCGCTGTCTAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCACAT
CCGTTTAAATACCGGCAGATTTACGGCTTCGCTTGATCTGGATTCGCAGTTGAATTTGTACCGAATCATTCAAGAGTTTC
TGTCTAATGCGGTCAAGCACTCTCAGGCATCGGATGTGCTGATTATGCTCATCAGTATTCAAAATAAAATCGTTCTTCAT
TATGAGGACGATGGCGTAGGGTTTGATCAAGAAAAAAATAATGAACATTCCATGAGTATGGGGCTTTCTGGCATTAAGGA
GAGAGTCAGGGCTTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAAT
TGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(576-643)

PDZ domain (PDZ_2)

(34-103)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(684-770)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.618

100

0.581