Detailed information NTG0950400

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: WHL51_RS02085
• Genome accession: NZ_CP148102
• Coordinates: 415351..416499 (+)
• Length: 382 a.a.
• NCBI ID: WP_003224987.1
• Uniprot ID: -
• Organism: Bacillus spizizenii str. W23
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 410351..421499

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHL51_RS02065	-	410735..411415 (-)	681	WP_003224979.1	ABC transporter ATP-binding protein	-
WHL51_RS02070	-	411431..412885 (-)	1455	WP_003224981.1	ABC transporter permease	-
WHL51_RS02075	yclJ	413098..413781 (+)	684	WP_003224983.1	two-component system response regulator YclJ	-
WHL51_RS02080	yclK	413768..415189 (+)	1422	WP_079996289.1	two-component system sensor histidine kinase YclK	-
WHL51_RS02085	rapC	415351..416499 (+)	1149	WP_003224987.1	response regulator aspartate phosphatase RapC	Regulator
WHL51_RS02090	phrC	416483..416605 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
WHL51_RS02095	-	416704..416811 (-)	108	WP_003224996.1	YjcZ family sporulation protein	-
WHL51_RS02100	-	416960..418324 (-)	1365	WP_003224998.1	aspartate kinase	-
WHL51_RS02105	ceuB	418709..419659 (+)	951	WP_003225000.1	petrobactin ABC transporter permease YclN	Machinery gene
WHL51_RS02110	yclO	419652..420599 (+)	948	WP_003225003.1	petrobactin ABC transporter permease YclO	-
WHL51_RS02115	yclP	420593..421351 (+)	759	WP_003225005.1	petrobactin ABC transporter ATP-binding protein YclP	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45593.58 Da
• Isoelectric Point: 4.8970

>NTDB_id=950400 WHL51_RS02085 WP_003224987.1 415351..416499(+) (rapC) [Bacillus spizizenii str. W23]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELNHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALDMAEAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIINSLPQAYFLITLIYYKRGKHDKASAYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=950400 WHL51_RS02085 WP_003224987.1 415351..416499(+) (rapC) [Bacillus spizizenii str. W23]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGCACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAACCACATGCAGCACGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGCCACCAGCTTATGCTTGATTATCTAGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCG
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTTGACTATTATGTGAATTTTTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTATAAACAGGCGGAGAAAAAGCTTTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATAGCTGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCACTGATCAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGGAATTTCGAACAAGCCGCACGCCATTTCAAACTGGCGCTCGATATGGCCG
AAGCAGAACAAAAAGCCCAGCTGGTCGGAAGAGCATATTACAATCTTGGGTTATGCTATTACAATCAAGACCTTCTTGAC
CCTGCTATTGACTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGAATCATTAATTCGCTGCCGCAAGCCTATTT
TTTAATCACCTTGATTTATTATAAACGGGGAAAACATGATAAAGCTTCGGCATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTACGCGGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	97.906	100	0.979
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568